SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 117 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30823 No candidate annotation 181.0450 16.615e-11
P30850 No candidate annotation 387.7083 12.766e-11
P30908 Pyrimido[5,4-d]pyrimidine 132.0437 11.372e-11
P30925 Ipamorelin 711.3759 19.089e-13
P30931 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12S-hydroxy-10E,14Z-prostadienoate-cyclo[8R,12S] 500.2216 12.365e-11
P30940 Leukotriene E3 441.2542 13.619e-11
P30962 Spongothymidine 258.0832 12.961e-12
P30997 7-(1-Methyl-2-oxopropyl)streptonigrin 576.1898 16.923e-11
P31058 (4Z)-Tetradec-4-enedioylcarnitine 399.2575 12.126e-11
P31113 No candidate annotation 182.1378 11.65e-11