Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31113

Metabolite ID
P31113
Deionized mass
182.1378 Da
Average m/z
183.1463
Average RT
16.2351
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)3.965e-14
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)4.117e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)3.246e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)3.69e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)9.604e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.807e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.807e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)7.087e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)6.171e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.999e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.962e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.33e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.194e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.194e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.194e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.543e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.315e-14
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)3.683e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)1.834e-12
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)9.884e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)1.407e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.65e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.65e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.65e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.65e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)7.957e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)7.957e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)7.957e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.903e-12
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)6.426e-11
Glyma.11G110100 hypothetical protein AT2G16510:AT2G16510:ATPase, F0/V0 complex, subunit C protein 1Chr11:8397135–8398949 (-)6.245e-12
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)3.474e-14
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.27e-13
Glyma.12G055100 hypothetical protein AT5G12900:AT5G12900:DNA double-strand break repair RAD50 ATPase 1Chr12:3988442–3991287 (-)7.727e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.69e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.352e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.352e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.352e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.31e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)6.008e-11
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)2.262e-12
Glyma.18G251400 hypothetical protein NA 1Chr18:53754942–53759244 (-)9.224e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)8.815e-13
Glyma.18G252100 hypothetical protein AT1G02090:FUS5:Proteasome component (PCI) domain protein 1Chr18:53885762–53894767 (+)7.678e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.849e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.331e-16
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.308e-12