SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G068800

Description hypothetical protein

Gene interval Chr09:6979166–6993110 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features354Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

354 matching features · page 1 of 36

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00134 N-[5-(4,5-Dihydro-1H-imidazol-2-yl)-2-hydroxy-5,6,7,8-tetrahydronaphthalen-1-yl]methanesulfonamide 309.1136 12.684e-12
P00286 2-Hydroxy-9-(4-hydroxy-3-methoxyphenyl)-1H-phenalen-1-one 318.0906 12.41e-12
P00357 1-Carboxyethylleucine 203.1140 18.855e-11
P00634 Valerylglycine 159.0878 13.466e-11
P00695 4-Chloro-8-methyl-7-(3-methyl-but-2-enyl)-6,7,8,9-tetrahydro-2H-2,7,9A-triaza-benzo[CD]azulene-1-thione 321.1065 15.667e-11
P00889 Diethylene glycol 106.0612 11.67e-12
P01178 1,1,1-Trifluoro-2,4-pentanedione 154.0224 11.317e-12
P01266 3-Hydroxy-4-aminopyridine sulfate 190.0072 11.02e-11
P01325 7-Methoxymurrayacine 307.1223 11.164e-12
P01623 Pentaerythritol mononitrate 181.0588 13.369e-13