Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P00634

Metabolite ID
P00634
Deionized mass
159.0878 Da
Average m/z
160.0954
Average RT
3.5950
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
92
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

92 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.246e-14
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)1.314e-11
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.588e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 2Chr06:49315918–49324382 (+)1.734e-14
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.08e-14
Glyma.07G068600 hypothetical protein NA 2Chr07:6192764–6197166 (+)5.685e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)2.405e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.202e-17
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.897e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.052e-12
Glyma.01G030500 hypothetical protein NA 1Chr01:3189212–3200277 (+)1.697e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)5.918e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.619e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.777e-15
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)7.462e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.059e-12
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)2.459e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.402e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.858e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.637e-14
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)6.785e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)6.785e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)6.784e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)4.97e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)1.735e-14
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)8.668e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.246e-14
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.246e-14
Glyma.06G307900 hypothetical protein NA 1Chr06:49664901–49674729 (+)3.955e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.39e-11
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)1.591e-12
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)1.755e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)8.109e-12
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)8.109e-12
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)1.755e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)1.835e-12
Glyma.07G072700 hypothetical protein NA 1Chr07:6612725–6619961 (+)5.21e-12
Glyma.07G072900 hypothetical protein NA 1Chr07:6636336–6643709 (+)2.994e-12
Glyma.07G073100 hypothetical protein NA 1Chr07:6656839–6661250 (-)2.188e-12
Glyma.07G073400 hypothetical protein AT2G45830:DTA2:downstream target of AGL15 2 1Chr07:6684539–6689265 (+)1.456e-11
Glyma.07G073500 hypothetical protein AT1G01770:AT1G01770:propionyl-CoA carboxylase 1Chr07:6693433–6700428 (+)1.456e-11
Glyma.07G073700 hypothetical protein AT1G01790:KEA1:K+ efflux antiporter 1 1Chr07:6705850–6716880 (+)1.456e-11
Glyma.07G073800 hypothetical protein NA 1Chr07:6720249–6727636 (+)1.456e-11
Glyma.07G073900 hypothetical protein AT3G61220:SDR1:NAD(P)-binding Rossmann-fold superfamily protein 1Chr07:6737705–6740485 (-)1.456e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.37e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.643e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.857e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)4.028e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)3.466e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.383e-11
Glyma.10G186500 PT7 NA 1Chr10:41946209–41950274 (-)4.594e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)2.47e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)6.699e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.595e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.734e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.733e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.183e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.183e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.405e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.582e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.582e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.582e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)7.72e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.729e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.897e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.052e-12
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)7.055e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)8.002e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.842e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.941e-16
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.819e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)5.258e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)5.258e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)6.765e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)6.758e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.531e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.155e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.2e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.588e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.524e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.524e-12
Glyma.18G040000 GAI AT1G66350:RGL1:RGA-like 1__AT3G03450:RGL2:RGA-like 2 1Chr18:3278869–3281985 (-)5.793e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.386e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.386e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.766e-13
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)6.236e-14
Glyma.20G107700 hypothetical protein AT2G16860:AT2G16860:GCIP-interacting family protein 1Chr20:35033414–35036538 (+)1.971e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)7.708e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)5.878e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.714e-13
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)6.72e-11