Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01266

Metabolite ID
P01266
Deionized mass
190.0072 Da
Average m/z
191.0157
Average RT
3.8580
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)7.419e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.042e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)2.496e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)4.902e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.294e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.004e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.56e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.944e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)4.613e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)1.273e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)1.83e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)6.37e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.234e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.234e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)7.42e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)7.42e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.101e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)3.597e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)2.586e-11
Glyma.07G136100 hypothetical protein NA 1Chr07:16113273–16117600 (+)9.513e-11
Glyma.07G136500 hypothetical protein AT3G53830:AT3G53830:Regulator of chromosome condensation (RCC1) family protein 1Chr07:16157535–16169721 (+)9.513e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)3.682e-12
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)1.02e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.204e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.66e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.513e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.435e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.812e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.812e-12
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)3.48e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.758e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.758e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.58e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.58e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.58e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)5.998e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.057e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.091e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.536e-14
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)7.053e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)4.673e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)4.673e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.599e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.829e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.764e-13
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)4.938e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.578e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.578e-14
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.082e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)9.016e-13