Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P00695

Metabolite ID
P00695
Deionized mass
321.1065 Da
Average m/z
322.1135
Average RT
3.6714
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
79
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

79 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.525e-13
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)3.167e-11
Glyma.01G158400 hypothetical protein AT4G35520:MLH3:MUTL protein homolog 3 2Chr01:49635856–49646618 (+)1.617e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)8.99e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 2Chr06:10709045–10716245 (-)2.105e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.794e-13
Glyma.15G019600 hypothetical protein AT5G48120:MET18:ARM repeat superfamily protein 2Chr15:1524472–1536978 (-)3.203e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.483e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)9.804e-14
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.756e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.122e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)1.004e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)1.004e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)1.004e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)1.004e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)1.004e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)1.004e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)1.004e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)3.167e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.517e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)9.432e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.012e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.349e-15
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)4.872e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)4.031e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.272e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.371e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.359e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.53e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.549e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)8.552e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.673e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.673e-12
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)2.39e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)1.648e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.475e-11
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)9.41e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.525e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.525e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)9.2e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.201e-11
Glyma.07G093700 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 1Chr07:8723740–8734056 (-)9.809e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)7.225e-12
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)1.87e-13
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)3.783e-13
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)1.719e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)5.667e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.72e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.153e-13
Glyma.10G256600 hypothetical protein NA 1Chr10:48330619–48332611 (-)4.088e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.518e-12
Glyma.12G015800 hypothetical protein NA 1Chr12:1126280–1132370 (-)1.107e-11
Glyma.12G018000 hypothetical protein NA 1Chr12:1252709–1256330 (-)1.95e-12
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)9.095e-15
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.701e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.701e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)5.074e-12
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)4.661e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.483e-11
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 1Chr15:1573643–1577917 (+)9.979e-11
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 1Chr15:3812816–3815263 (+)5.112e-11
Glyma.15G048800 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:3852038–3855379 (+)2.623e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.479e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.684e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.457e-11
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)1.164e-11
Glyma.16G041800 hypothetical protein NA 1Chr16:3914214–3917387 (-)7.573e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.081e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)6.957e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.42e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.647e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.797e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)5.429e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.429e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)6.371e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.666e-17
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.666e-17
Glyma.19G127700 hypothetical protein AT5G12250:TUB6:beta-6 tubulin 1Chr19:38632803–38635633 (+)7.068e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.055e-11