Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01178

Metabolite ID
P01178
Deionized mass
154.0224 Da
Average m/z
155.0302
Average RT
3.8199
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
91
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

91 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)1.395e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.587e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)9.314e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.251e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)4.789e-14
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)7.594e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 2Chr09:5571201–5579976 (-)2.515e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.111e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.111e-15
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)5.615e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)1.396e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)3.615e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.398e-12
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)9.464e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)9.464e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)9.464e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.646e-11
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)3.372e-12
Glyma.05G188500 hypothetical protein AT3G27740:CARA:carbamoyl phosphate synthetase A 1Chr05:37445235–37448125 (+)5.481e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)6.97e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)1.546e-12
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)8.193e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)6.29e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.566e-13
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.861e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.861e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)1.858e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)7.875e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.742e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.207e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.742e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.742e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.207e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)9.718e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.587e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.587e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.643e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)8.487e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)5.475e-11
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)1.558e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)7.121e-11
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)3.624e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)9.084e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)5.033e-11
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 1Chr09:5504630–5507434 (+)2.515e-11
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 1Chr09:5513108–5520158 (+)2.515e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)1.317e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.721e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.629e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.178e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.093e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.093e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.424e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.962e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.962e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.111e-15
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)2.404e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.814e-14
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 1Chr15:3736217–3746037 (+)4.961e-11
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 1Chr15:3777567–3783739 (+)4.961e-11
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 1Chr15:3812816–3815263 (+)9.795e-11
Glyma.15G048800 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:3852038–3855379 (+)1.053e-11
Glyma.15G049800 hypothetical protein NA 1Chr15:3927843–3933656 (-)7.994e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.414e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.123e-14
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)5.567e-12
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)6.635e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.377e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.377e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.809e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.963e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.489e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.114e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.403e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)8.763e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.853e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.524e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.841e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)9.314e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.522e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.522e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)1.098e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.251e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.431e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.431e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.439e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.224e-12
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)2.098e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)4.492e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.316e-12
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 1Chr20:35468911–35474203 (+)9.966e-11