SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G015700

Description hypothetical protein

Gene interval Chr07:1244977–1251198 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G79750:NADP-ME4:NADP-malic enzyme 4

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1774Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0028.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1774 matching features · page 14 of 178

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04344 Sulfameter 280.0659 13.301e-14
P04365 Monascorubramine 381.1953 17.022e-11
P04366 1-Guanidino-1-deoxy-scyllo-inositol 4-phosphate 301.0725 14.589e-12
P04385 5-Hydroxy-3,4,7-triphenyl-2,6-benzofurandione 392.1077 14.083e-12
P04391 Coptisine 319.0855 13.795e-11
P04450 Clofazimine glucuronide 664.1422 19.25e-11
P04473 Dibenzothiophene 184.0337 13.364e-12
P04475 No candidate annotation 346.5468 11.65e-11
P04532 (E)-Methyl-4-hydroxycinnamate 178.0633 13.445e-13
P04573 Am 580 351.1833 12.747e-12