Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04344

Metabolite ID
P04344
Deionized mass
280.0659 Da
Average m/z
281.0731
Average RT
8.0974
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)2.311e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.177e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.813e-16
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.303e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.634e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)4.272e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)3.617e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)7.426e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)8.443e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.198e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.033e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)9.958e-13
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)9.997e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.177e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.168e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.626e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.787e-13
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)7.697e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)7.835e-14
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)9.204e-12
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)8.34e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)9.62e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)9.62e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.423e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.301e-14
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)6.049e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)6.049e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.177e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.177e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.177e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.177e-14
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)9.361e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)9.361e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.079e-16
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.201e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)6.492e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.889e-13
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.889e-13
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)1.63e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)8.912e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.196e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.196e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.76e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.303e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)4.965e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.344e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.23e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.23e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)4.215e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.821e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.638e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.643e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.643e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.635e-14
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.635e-14
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)1.263e-11
Glyma.18G044100 hypothetical protein NA 1Chr18:3809348–3812858 (-)1.774e-12
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 1Chr18:3813589–3817289 (-)1.774e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.218e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.032e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)3.989e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.374e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.374e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)2.634e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.402e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.402e-14
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)5.72e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.036e-14
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)8.972e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.676e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)2.933e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)9.254e-13
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)2.967e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.786e-12
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)1.107e-11