Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04573

Metabolite ID
P04573
Deionized mass
351.1833 Da
Average m/z
352.1925
Average RT
8.1973
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.09e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)1.214e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.992e-17
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.372e-14
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)8.356e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)1.028e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.62e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.725e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.757e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.582e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.582e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.72e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.09e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.09e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.747e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)8.769e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)4.058e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)4.058e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)4.058e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.459e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.459e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.27e-15
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)4.588e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.372e-14
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)4.389e-12
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)6.327e-11
Glyma.14G202500 hypothetical protein NA 1Chr14:46773824–46775761 (+)6.327e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)1.43e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.876e-12
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.47e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.71e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.192e-13
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.216e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.173e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.492e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)5.913e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.235e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)3.235e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)7.486e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.48e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.48e-15
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.394e-11