Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04391

Metabolite ID
P04391
Deionized mass
319.0855 Da
Average m/z
320.0909
Average RT
8.1107
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)8.326e-17
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)6.917e-12
Glyma.08G303400 hypothetical protein NA 2Chr08:42139097–42147365 (+)5.916e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)9.073e-11
Glyma.16G111100 hypothetical protein NA 2Chr16:24438458–24444801 (+)8.326e-17
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 2Chr16:24720965–24731678 (-)5.475e-12
Glyma.01G021000 hypothetical protein NA 1Chr01:2122589–2125447 (+)5.904e-11
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)1.03e-13
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)1.56e-13
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)1.56e-13
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)1.56e-13
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)2.977e-13
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.12e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.545e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)7.368e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.302e-19
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.254e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.897e-15
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.739e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.739e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.795e-11
Glyma.08G189500 hypothetical protein NA 1Chr08:15206364–15212242 (+)2.312e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)7.567e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)7.567e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)5.837e-14
Glyma.09G200300 hypothetical protein NA 1Chr09:42466263–42471449 (+)1.681e-11
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)3.149e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.451e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.451e-14
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)1.344e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.451e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.451e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.683e-12
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)7.9e-14
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)4.522e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)3.938e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.302e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.361e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.302e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.302e-12
Glyma.16G111200 hypothetical protein AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) 1Chr16:24455709–24466236 (+)6.968e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)8.757e-15
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.922e-11
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr16:31774664–31777363 (+)1.144e-13
Glyma.16G157800 hypothetical protein NA 1Chr16:31832373–31834430 (-)1.879e-12
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)3.502e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)2.31e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.737e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.171e-12