Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P04366

Metabolite ID
P04366
Deionized mass
301.0725 Da
Average m/z
302.0797
Average RT
8.1038
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
118
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

118 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.45e-11
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)6.174e-12
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 3Chr18:12220182–12260477 (+)1.804e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.678e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)3.677e-14
Glyma.13G224800 hypothetical protein NA 2Chr13:33748627–33756494 (-)4.603e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.204e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)8.897e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.468e-13
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 2Chr16:34364037–34367765 (-)8.811e-14
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)4.889e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.45e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)8.581e-13
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)7.423e-13
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)7.423e-13
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)1.091e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.835e-14
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.075e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.532e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.977e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)7.413e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)7.413e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)7.413e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)7.413e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)7.413e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)7.413e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)7.412e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)6.377e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.548e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)8.76e-13
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)5.959e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.375e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.223e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.209e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)4.086e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)7.12e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)8.649e-14
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)8.392e-11
Glyma.05G219800 TRE1 trehalase 1 AT4G24040:TRE1:trehalase 1 1Chr05:39920183–39925215 (+)4.745e-13
Glyma.05G220100 hypothetical protein AT1G33170:AT1G33170:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:39950499–39956022 (+)4.745e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.948e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.797e-24
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.718e-17
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)6.879e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.517e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.517e-15
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)4.43e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.248e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)2.025e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.589e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)6.922e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)7.302e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)7.302e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.678e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.678e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.678e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.678e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)6.203e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.351e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.619e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)8.833e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.385e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.385e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.384e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.384e-12
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)3.916e-12
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)8.682e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)3.855e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.677e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.233e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)7.902e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)3.929e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)8.56e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)8.56e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)8.56e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.096e-15
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)8.465e-12
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)4.603e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.232e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.232e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.897e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.024e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.898e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.898e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.91e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)1.877e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)8.897e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)6.571e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)5.302e-14
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.973e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)6.174e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)6.174e-12
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)8.733e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.212e-13
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)3.076e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.502e-15
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)7.827e-11
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 1Chr16:35625666–35634395 (-)3.343e-13
Glyma.16G194100 hypothetical protein NA 1Chr16:35633570–35637343 (+)3.343e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.491e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)9.994e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.17e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.17e-11
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)8.875e-13
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)8.875e-13
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)8.875e-13
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.95e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)8.539e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)1.434e-16
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)1.597e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)7.592e-14
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 1Chr18:48258271–48266554 (-)4.903e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)7.517e-13
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)9.386e-13
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)7.391e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)2.302e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.955e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)2.991e-11