SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.19G026600

Description hypothetical protein

Gene interval Chr19:3303658–3312907 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G13700:PAP23:purple acid phosphatase 23

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓

Associated metabolite features2254Overlap

Maximum supporting SNP records4

Features with ≥2 supporting SNP records2254

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0089.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

AT4G13700NCBI Gene ↗UniProt ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2254 matching features · page 208 of 226

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P49873	Stemaphylline	279.2251	2	1.924e-15
P49896	3alpha-Hydroxyfuroepaltol	250.1573	2	1.87e-11
P49915	(6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine	425.2704	2	6.056e-11
P49937	(5Z,7E)-(1S,3R)-23-[3-(1-hydroxy-1-methylethyl)phenyl]-24-nor-9,10-seco-5,7,10(19)-cholatrien-22-yne-1,3-diol	474.3140	2	5.272e-12
P50043	2,5-Dimethylfuran	96.0579	2	1.957e-12
P50051	No candidate annotation	187.1442	2	8.269e-11
P50052	A6 Peptide	910.4374	2	4.427e-19
P50054	No candidate annotation	930.4138	2	3.869e-14
P50092	No candidate annotation	150.1378	2	4.054e-12
P50109	No candidate annotation	181.1162	2	4.729e-13