SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G025300

Description hypothetical protein

Gene interval Chr16:2438122–2440528 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features890Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

890 matching features · page 79 of 89

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48869 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1465 14.691e-12
P49105 Methyl camaralate 542.3555 19.656e-11
P49161 Homocitrulline 189.1101 12.209e-13
P49182 Noberastine 311.1785 11.518e-15
P49400 No candidate annotation 471.7022 17.04e-12
P49588 Cammaconine 407.2631 18.719e-12
P49591 3-O-(beta-D-glucopyranosyl)-2beta,3beta,14alpha,22R-tetrahydroxy-5beta-cholest-7-ene-6-one 610.3710 12.124e-11
P49628 Teferidin 342.2185 14.766e-12
P49761 No candidate annotation 97.5033 11.783e-14
P49792 Safranal 150.1027 12.044e-11