Overview Annotation GWAS Evidence Associated genes

P49628

Metabolite ID
P49628
Deionized mass
342.2185 Da
Average m/z
343.2261
Average RT
26.2234
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
37
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

37 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 7Chr16:36856833–36863994 (-)3.382e-16
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 3Chr16:36806718–36809299 (+)2.138e-15
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 3Chr16:36871978–36878151 (-)7.352e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.184e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)1.283e-11
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)4.158e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.951e-11
Glyma.04G086300 hypothetical protein NA 1Chr04:7340889–7346287 (+)1.341e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.683e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.773e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)7.049e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.98e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)3.436e-12
Glyma.09G050900 hypothetical protein AT4G20050:QRT3:Pectin lyase-like superfamily protein 1Chr09:4447546–4450090 (+)2.644e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)6.643e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)7.713e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)7.713e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)7.713e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)6.636e-12
Glyma.10G186500 PT7 NA 1Chr10:41946209–41950274 (-)1.336e-14
Glyma.10G187600 hypothetical protein NA 1Chr10:42055791–42063117 (-)9.66e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.121e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.275e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.36e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)4.766e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)4.766e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.147e-11
Glyma.16G207700 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 1Chr16:36739878–36743378 (-)7.246e-11
Glyma.16G207800 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 1Chr16:36750028–36751833 (-)1.661e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)2.538e-14
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36776806–36778169 (+)5.949e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.029e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.184e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)9.484e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)9.484e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.699e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)5.051e-12