SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.15G107800

Description hypothetical protein

Gene interval Chr15:8473049–8483746 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G64570:DUO3:Homeodomain-like superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features109Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

109 matching features · page 9 of 11

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P47142 4'-(beta-D-Glucopyranosyloxy)-7',8'-dihydro-4,4'-diapo-psi,psi-caroten-4-oic acid 608.3354 17.695e-13
P47471 1-(1Z-eicosenyl)-glycero-3-phospho-(1'-myo-inositol) 612.3603 17.162e-11
P47637 No candidate annotation 90.0461 19.407e-11
P47673 No candidate annotation 90.0465 17.15e-15
P48259 1a,1b-dihomo-5,9,11-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8,12] 382.2739 19.664e-11
P48488 Mecarbinzid 308.0933 13.015e-11
P48814 1-(11,12-Methyleneoctadecanoyl)-sn-glycero-2,3-cyclic phosphate 432.2624 12.864e-13
P48939 No candidate annotation 228.1862 16.174e-11
P49852 Ilicifolioside C 614.2394 15.235e-12
P49951 (6E,8E,10R,12Z)-10-Hydroxy-3-oxooctadecatrienoic acid 308.2041 11.76e-12