Overview Annotation GWAS Evidence Associated genes

P47142

Metabolite ID
P47142
Deionized mass
608.3354 Da
Average m/z
609.3443
Average RT
24.5563
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
150
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

150 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)2.611e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.651e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.359e-11
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)4.394e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)3.685e-11
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)3.984e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)3.91e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)5.789e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)7.898e-14
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)4.191e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.323e-13
Glyma.09G058900 hypothetical protein NA 2Chr09:5397968–5404650 (-)1.01e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.469e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.469e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.161e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.132e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)3.88e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)2.097e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)1.063e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.568e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.568e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)6.196e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.963e-12
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)9.452e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)4.2e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)2.91e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)2.91e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)2.91e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.584e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.919e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.574e-13
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)8.468e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.3e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)7.961e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.677e-16
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.476e-16
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.476e-16
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.954e-18
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.132e-18
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.132e-18
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.132e-18
Glyma.05G165200 hypothetical protein NA 1Chr05:35586701–35592272 (+)7.585e-13
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)7.585e-13
Glyma.05G166000 hypothetical protein NA 1Chr05:35657133–35657621 (-)7.585e-13
Glyma.05G166400 hypothetical protein NA 1Chr05:35692494–35699192 (+)4.063e-12
Glyma.05G217100 hypothetical protein AT1G64440:RHD1:NAD(P)-binding Rossmann-fold superfamily protein 1Chr05:39735139–39739763 (+)2.38e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)3.771e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.124e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)9.082e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)9.082e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)9.082e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)9.082e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.188e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.773e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.445e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.269e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.269e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)2.694e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)2.694e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)2.958e-12
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)4.137e-12
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)8.036e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)8.036e-11
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)9.895e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)9.515e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)7.81e-11
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)2.065e-11
Glyma.06G285200 hypothetical protein AT2G31060:EMB2785:elongation factor family protein 1Chr06:47380397–47390651 (+)1.786e-11
Glyma.06G293600 hypothetical protein AT1G03650:AT1G03650:Acyl-CoA N-acyltransferases (NAT) superfamily protein 1Chr06:48251255–48252791 (+)7.724e-11
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 1Chr06:48253149–48265560 (+)3.994e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.789e-11
Glyma.07G078900 hypothetical protein AT3G61080:AT3G61080:Protein kinase superfamily protein 1Chr07:7187362–7192149 (+)1.168e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.781e-14
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.502e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)5.549e-12
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)8.251e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)2.861e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)1.453e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)7.898e-14
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)1.211e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)7.999e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.323e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.323e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.323e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.323e-13
Glyma.08G137600 hypothetical protein AT4G39780:AT4G39780:Integrase-type DNA-binding superfamily protein 1Chr08:10551821–10553620 (-)5.731e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)2.054e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)2.054e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)6.82e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.863e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)4.478e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.35e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.889e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.889e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.535e-11
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 1Chr13:24601574–24606756 (-)4.106e-11
Glyma.13G133900 hypothetical protein NA 1Chr13:24613843–24616128 (+)4.106e-11
Glyma.13G134000 hypothetical protein NA 1Chr13:24618272–24619048 (-)4.106e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.651e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.694e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.283e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.284e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.469e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)1.631e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.232e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.232e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.232e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.319e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.995e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.94e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)8.951e-11
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)3.972e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.161e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)9.634e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.634e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.416e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.668e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.668e-12
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)3.2e-13
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)7.695e-13
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)2.372e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)5.235e-12
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 1Chr15:8705907–8710609 (-)1.013e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.188e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.329e-12
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)3.446e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.833e-14
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)3.72e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.801e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.418e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)2.219e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.596e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.822e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)8.586e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.786e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.359e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.625e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.625e-13
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)3.809e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)8.934e-12
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)1.654e-12
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)3.903e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)8.741e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.924e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.924e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.284e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)7.839e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.204e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)9.393e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)8.687e-13