Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P48488

Metabolite ID
P48488
Deionized mass
308.0933 Da
Average m/z
309.1001
Average RT
25.3376
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.802e-12
Glyma.15G106000 hypothetical protein AT4G21760:BGLU47:beta-glucosidase 47 2Chr15:8307131–8316135 (+)4.811e-14
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)5.367e-13
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)6.313e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)6.313e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)7.8e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)2.618e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)5.802e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.802e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)8.385e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)8.385e-12
Glyma.15G105900 hypothetical protein NA 1Chr15:8301661–8304992 (+)2.565e-12
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)1.094e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)3.015e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)4.637e-12
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)1.371e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)1.074e-12
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 1Chr15:8705907–8710609 (-)2.344e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.674e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.554e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.554e-11
Glyma.20G013700 hypothetical protein NA 1Chr20:1223277–1224375 (+)4.672e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.053e-11