P47637
Metabolite ID
P47637
Deionized mass
90.0461 Da
Average m/z
91.0533
Average RT
24.8886
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
125
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
125 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 3 | Chr13:31727841–31735910 (-) | 3.886e-11 | |
| Glyma.20G106300 | hypothetical protein | AT2G16950:TRN1:transportin 1 | 3 | Chr20:34868954–34885305 (-) | 7.021e-11 | |
| Glyma.03G242800 | hypothetical protein | AT4G08630:AT4G08630:fas-binding factor-like protein | 2 | Chr03:44064511–44073939 (+) | 6.914e-13 | |
| Glyma.11G241200 | hypothetical protein | AT5G10320:AT5G10320:ATP synthase subunit B | 2 | Chr11:33537120–33542455 (-) | 6.206e-12 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 7.75e-12 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 7.217e-15 | |
| Glyma.14G171400 | hypothetical protein | NA | 2 | Chr14:42398866–42404627 (+) | 4.643e-11 | |
| Glyma.14G176900 | SGF14K | 14-3-3 protein SGF14k | AT1G78300:GRF2:ral regulatory factor 2 | 2 | Chr14:43637893–43642553 (+) | 5.748e-14 |
| Glyma.16G172500 | hypothetical protein | AT3G59140:ABCC10:multidrug resistance-associated protein 14 | 2 | Chr16:33322352–33330062 (+) | 2.732e-11 | |
| Glyma.17G216700 | hypothetical protein | AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein | 2 | Chr17:36510062–36519347 (+) | 8.906e-11 | |
| Glyma.18G230700 | hypothetical protein | AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) | 2 | Chr18:51943730–51947645 (+) | 2.59e-12 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 2 | Chr20:34984922–34988496 (+) | 2.712e-15 | |
| Glyma.01G010400 | SLTI248 | DEAD-box RNA helicase | AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein | 1 | Chr01:1009200–1013846 (+) | 3.093e-11 |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 7.659e-12 | |
| Glyma.02G116600 | hypothetical protein | AT1G13770:RUS3:root UVB sensitive protein (Protein of unknown function, DUF647) | 1 | Chr02:11357006–11362220 (-) | 8.982e-11 | |
| Glyma.02G116700 | hypothetical protein | AT1G68980:AT1G68980:Tetratricopeptide repeat (TPR)-like superfamily protein__AT1G69290:AT1G69290:Pentatricopeptide repe… | 1 | Chr02:11375844–11381371 (+) | 8.982e-11 | |
| Glyma.02G116800 | hypothetical protein | NA | 1 | Chr02:11389946–11393074 (+) | 8.982e-11 | |
| Glyma.02G117100 | hypothetical protein | AT2G03620:MGT3:magnesium transporter 3 | 1 | Chr02:11400594–11409016 (-) | 8.982e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 7.586e-13 | |
| Glyma.03G172800 | hypothetical protein | NA | 1 | Chr03:38686815–38687522 (-) | 8.915e-11 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 7.985e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 2.368e-13 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 1.418e-12 | |
| Glyma.04G116900 | hypothetical protein | NA | 1 | Chr04:13696275–13700803 (+) | 5.699e-12 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 1.963e-13 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 1.171e-13 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.171e-13 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 5.208e-15 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.154e-14 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.154e-14 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.154e-14 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 7.659e-12 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 4.818e-12 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 6.858e-15 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 6.111e-16 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 9.835e-13 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 3.714e-12 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 3.714e-12 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 8.749e-11 | |
| Glyma.07G068200 | hypothetical protein | AT4G00310:EDA8:Putative membrane lipoprotein | 1 | Chr07:6146155–6148036 (-) | 2.778e-11 | |
| Glyma.07G075000 | hypothetical protein | AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein | 1 | Chr07:6821674–6829551 (-) | 2.659e-11 | |
| Glyma.07G075300 | hypothetical protein | NA | 1 | Chr07:6843882–6845602 (-) | 2.659e-11 | |
| Glyma.07G078300 | hypothetical protein | NA | 1 | Chr07:7150800–7154478 (-) | 1.095e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.897e-13 | |
| Glyma.08G114700 | hypothetical protein | AT3G13600:AT3G13600:calmodulin-binding family protein | 1 | Chr08:8768854–8772973 (-) | 8.549e-12 | |
| Glyma.08G210200 | hypothetical protein | NA | 1 | Chr08:17010526–17012557 (+) | 8.109e-15 | |
| Glyma.08G210300 | hypothetical protein | NA | 1 | Chr08:17011623–17012548 (-) | 8.109e-15 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 7.194e-19 | |
| Glyma.08G330400 | hypothetical protein | NA | 1 | Chr08:44820327–44823668 (+) | 5.838e-12 | |
| Glyma.08G330500 | hypothetical protein | AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein | 1 | Chr08:44824324–44827127 (-) | 5.838e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 7.279e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 3.415e-11 | |
| Glyma.10G238200 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr10:46680865–46684088 (+) | 1.645e-13 | |
| Glyma.10G238300 | hypothetical protein | AT5G07240:IQD24:IQ-domain 24 | 1 | Chr10:46688122–46693051 (-) | 1.917e-11 | |
| Glyma.10G238700 | hypothetical protein | NA | 1 | Chr10:46721439–46725173 (+) | 1.917e-11 | |
| Glyma.10G239000 | hypothetical protein | NA | 1 | Chr10:46755702–46757579 (-) | 1.917e-11 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 1.844e-12 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 1.22e-12 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 1.22e-12 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 1.22e-12 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 1.22e-12 | |
| Glyma.11G105500 | hypothetical protein | AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 | 1 | Chr11:8015639–8020644 (-) | 7.274e-12 | |
| Glyma.11G240600 | hypothetical protein | NA | 1 | Chr11:33491895–33493311 (+) | 3.585e-11 | |
| Glyma.11G241000 | hypothetical protein | AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein | 1 | Chr11:33526493–33531210 (+) | 2.055e-14 | |
| Glyma.11G241300 | hypothetical protein | AT4G39990:RABA4B:RAB GTPase homolog A4B | 1 | Chr11:33552339–33555298 (+) | 4.647e-12 | |
| Glyma.11G241400 | hypothetical protein | AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr11:33556332–33563163 (-) | 4.958e-13 | |
| Glyma.11G241900 | hypothetical protein | NA | 1 | Chr11:33589346–33594428 (-) | 4.958e-13 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 3.752e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 3.752e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 1.915e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 1.915e-12 | |
| Glyma.12G228000 | hypothetical protein | AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein | 1 | Chr12:38789187–38797498 (+) | 2.923e-12 | |
| Glyma.12G228300 | hypothetical protein | AT3G15030:TCP4:TCP family transcription factor 4 | 1 | Chr12:38813527–38816237 (-) | 1.623e-12 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 3.886e-11 | |
| Glyma.13G203600 | hypothetical protein | AT5G13490:AAC2:ADP/ATP carrier 2 | 1 | Chr13:31753843–31756013 (-) | 6.32e-11 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 3.886e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 2.649e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 1.121e-11 | |
| Glyma.14G094200 | hypothetical protein | AT5G11840:AT5G11840:YCF36, putative (DUF1230) | 1 | Chr14:8770378–8774149 (-) | 1.752e-12 | |
| Glyma.14G094300 | hypothetical protein | NA | 1 | Chr14:8771316–8772515 (+) | 1.752e-12 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 5.202e-14 | |
| Glyma.14G119800 | hypothetical protein | AT1G43850:SEU:SEUSS transcriptional co-regulator | 1 | Chr14:16751592–16763348 (-) | 2.745e-12 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 7.217e-15 | |
| Glyma.14G171200 | hypothetical protein | AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein | 1 | Chr14:42387905–42389129 (+) | 4.643e-11 | |
| Glyma.14G176600 | hypothetical protein | NA | 1 | Chr14:43565478–43570243 (+) | 2.248e-11 | |
| Glyma.14G177100 | hypothetical protein | AT1G22450:COX6B:cytochrome C oxidase 6B | 1 | Chr14:43661177–43665659 (+) | 5.939e-13 | |
| Glyma.14G177500 | hypothetical protein | AT3G13620:PUT4:Amino acid permease family protein | 1 | Chr14:43740577–43742476 (-) | 2.284e-12 | |
| Glyma.14G179900 | hypothetical protein | NA | 1 | Chr14:44227886–44232217 (-) | 2.741e-11 | |
| Glyma.14G201600 | hypothetical protein | NA | 1 | Chr14:46703283–46706500 (+) | 8.44e-12 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 8.44e-12 | |
| Glyma.14G201800 | hypothetical protein | AT5G58390:AT5G58390:Peroxidase superfamily protein | 1 | Chr14:46728613–46733836 (+) | 4.727e-12 | |
| Glyma.14G202400 | hypothetical protein | AT1G21480:AT1G21480:Exostosin family protein | 1 | Chr14:46768802–46772377 (+) | 2.077e-11 | |
| Glyma.14G202500 | hypothetical protein | NA | 1 | Chr14:46773824–46775761 (+) | 2.077e-11 | |
| Glyma.14G204400 | hypothetical protein | AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 | 1 | Chr14:46936057–46943868 (-) | 4.502e-12 | |
| Glyma.15G009800 | hypothetical protein | NA | 1 | Chr15:753771–758859 (-) | 1.547e-11 | |
| Glyma.15G107500 | hypothetical protein | NA | 1 | Chr15:8435042–8443925 (+) | 6.435e-11 | |
| Glyma.15G107800 | hypothetical protein | AT1G64570:DUO3:Homeodomain-like superfamily protein | 1 | Chr15:8473049–8483746 (+) | 9.407e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 2.454e-12 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 2.951e-11 | |
| Glyma.15G256300 | hypothetical protein | NA | 1 | Chr15:48546007–48547401 (-) | 1.127e-11 | |
| Glyma.16G028100 | hypothetical protein | AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein | 1 | Chr16:2725294–2733429 (-) | 1.826e-12 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 2.865e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 4.999e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 6.768e-11 | |
| Glyma.17G218400 | hypothetical protein | NA | 1 | Chr17:36900654–36906204 (+) | 1.69e-11 | |
| Glyma.18G220200 | hypothetical protein | AT2G38650:GAUT7:galacturonosyltransferase 7 | 1 | Chr18:50714270–50723555 (-) | 3.168e-13 | |
| Glyma.18G220300 | hypothetical protein | NA | 1 | Chr18:50719690–50720509 (-) | 3.168e-13 | |
| Glyma.18G220800 | hypothetical protein | NA | 1 | Chr18:50782488–50785467 (+) | 6.066e-11 | |
| Glyma.18G228300 | hypothetical protein | AT1G01920:AT1G01920:SET domain-containing protein | 1 | Chr18:51737569–51744789 (-) | 3.279e-11 | |
| Glyma.18G228400 | hypothetical protein | AT5G35730:AT5G35730:EXS (ERD1/XPR1/SYG1) family protein | 1 | Chr18:51748248–51755826 (+) | 3.279e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 3.754e-12 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 3.754e-12 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 3.143e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 1.938e-12 | |
| Glyma.20G105100 | hypothetical protein | NA | 1 | Chr20:34737596–34737811 (-) | 1.072e-13 | |
| Glyma.20G105500 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… | 1 | Chr20:34813357–34815998 (-) | 7.24e-13 | |
| Glyma.20G106800 | hypothetical protein | AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein | 1 | Chr20:34935548–34940516 (-) | 1.307e-11 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 3.293e-16 | |
| Glyma.20G107000 | hypothetical protein | NA | 1 | Chr20:34968161–34968457 (+) | 1.571e-11 | |
| Glyma.20G107500 | hypothetical protein | AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr20:35011922–35015196 (-) | 6.665e-11 | |
| Glyma.20G107700 | hypothetical protein | AT2G16860:AT2G16860:GCIP-interacting family protein | 1 | Chr20:35033414–35036538 (+) | 9.591e-12 | |
| Glyma.20G107900 | hypothetical protein | NA | 1 | Chr20:35044042–35046452 (-) | 3.747e-11 | |
| Glyma.20G108000 | hypothetical protein | NA | 1 | Chr20:35047833–35051623 (-) | 7.337e-11 | |
| Glyma.20G108900 | hypothetical protein | AT4G24175:AT4G24175:kinesin-like protein | 1 | Chr20:35119868–35122488 (+) | 6.104e-12 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 7.446e-13 |