SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G064300

Description hypothetical protein

Gene interval Chr11:4849799–4851673 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36780:BEH2:BES1/BZR1 homolog 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0036.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1116 matching features · page 111 of 112

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54509 n2-Acetyl,n6-methyllysine 202.1324 11.41e-11
P54535 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1223 12.521e-11
P54576 3-hydroxytetradecanedioylcarnitine 417.2756 17.999e-13
P54622 (3E,5Z)-1,3,5-Heptatriene 94.0775 11.465e-11
P54666 3-Caffeoyl-4-feruloylquinic acid 530.1391 13.549e-11
P54745 Notoginsenoside T2 666.4304 14.143e-11
P54754 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2692 14.371e-11
P54763 Cyromazine 166.0978 18.884e-14
P54894 Cefoperazone A 663.1627 12.16e-11
P54898 No candidate annotation 665.1605 11.506e-11