P54535
Metabolite ID
P54535
Deionized mass
202.1223 Da
Average m/z
203.1291
Average RT
31.0863
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
110
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
110 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.15G192700 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 3 | Chr15:21029024–21058079 (-) | 4.848e-12 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 3 | Chr16:35170253–35173950 (-) | 1.847e-13 | |
| Glyma.01G126800 | hypothetical protein | NA | 2 | Chr01:43602195–43612710 (+) | 3.736e-11 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 2 | Chr03:5113019–5121557 (+) | 8.568e-12 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 2.453e-11 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 2.991e-13 | |
| Glyma.15G257100 | hypothetical protein | AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein | 2 | Chr15:48661607–48665946 (-) | 2.711e-11 | |
| Glyma.16G147400 | hypothetical protein | NA | 2 | Chr16:30817535–30821568 (+) | 8.292e-13 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1134716–1143232 (+) | 2.868e-12 | |
| Glyma.19G011900 | hypothetical protein | AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… | 2 | Chr19:1148510–1149495 (+) | 4.507e-12 | |
| Glyma.19G128200 | hypothetical protein | NA | 2 | Chr19:38739769–38743404 (+) | 1.183e-17 | |
| Glyma.01G121400 | hypothetical protein | AT5G01400:ESP4:HEAT repeat-containing protein | 1 | Chr01:41808055–41828625 (-) | 1.341e-11 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 2.353e-13 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 2.764e-13 | |
| Glyma.01G124800 | hypothetical protein | AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 | 1 | Chr01:43072403–43076304 (+) | 3.956e-11 | |
| Glyma.01G125400 | hypothetical protein | NA | 1 | Chr01:43394231–43404097 (-) | 3.956e-11 | |
| Glyma.01G125500 | hypothetical protein | NA | 1 | Chr01:43398981–43401979 (+) | 3.956e-11 | |
| Glyma.01G126000 | hypothetical protein | AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein | 1 | Chr01:43477322–43480661 (-) | 3.956e-11 | |
| Glyma.01G126300 | hypothetical protein | NA | 1 | Chr01:43513210–43516682 (-) | 3.956e-11 | |
| Glyma.01G126400 | hypothetical protein | NA | 1 | Chr01:43526917–43529405 (-) | 3.956e-11 | |
| Glyma.01G126500 | hypothetical protein | NA | 1 | Chr01:43543307–43549330 (-) | 3.956e-11 | |
| Glyma.01G126900 | hypothetical protein | NA | 1 | Chr01:43632082–43635399 (+) | 3.736e-11 | |
| Glyma.01G230400 | hypothetical protein | AT2G40935:AT2G40935:PLAC8 family protein | 1 | Chr01:55782953–55786502 (+) | 3.766e-11 | |
| Glyma.01G231400 | hypothetical protein | AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 | 1 | Chr01:55836387–55840615 (+) | 3.423e-11 | |
| Glyma.02G296300 | hypothetical protein | AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein | 1 | Chr02:47399263–47406220 (-) | 5.218e-12 | |
| Glyma.03G021600 | hypothetical protein | AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … | 1 | Chr03:2240686–2246512 (-) | 1.03e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 4.909e-13 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 1.908e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.974e-13 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.846e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 7.186e-12 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 1.416e-11 | |
| Glyma.07G068400 | hypothetical protein | AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein | 1 | Chr07:6173172–6180430 (-) | 7.275e-11 | |
| Glyma.07G068600 | hypothetical protein | NA | 1 | Chr07:6192764–6197166 (+) | 7.275e-11 | |
| Glyma.07G068700 | hypothetical protein | AT2G46060:AT2G46060:transmembrane protein-like protein | 1 | Chr07:6200187–6208590 (+) | 2.829e-11 | |
| Glyma.07G068800 | hypothetical protein | NA | 1 | Chr07:6211775–6221107 (-) | 2.829e-11 | |
| Glyma.07G069100 | hypothetical protein | NA | 1 | Chr07:6246145–6250192 (+) | 7.275e-11 | |
| Glyma.07G069400 | hypothetical protein | AT2G46020:BRM:transcription regulatory protein SNF2 | 1 | Chr07:6270176–6283087 (-) | 2.789e-12 | |
| Glyma.07G069600 | hypothetical protein | AT4G00370:ANTR2:Major facilitator superfamily protein | 1 | Chr07:6307073–6313498 (-) | 3.616e-11 | |
| Glyma.07G087700 | hypothetical protein | AT3G24495:MSH7:MUTS homolog 7 | 1 | Chr07:8111751–8121053 (+) | 2.712e-14 | |
| Glyma.08G149500 | hypothetical protein | NA | 1 | Chr08:11460264–11465243 (-) | 5.096e-11 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 4.023e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.372e-11 | |
| Glyma.10G238200 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr10:46680865–46684088 (+) | 3.512e-12 | |
| Glyma.10G238300 | hypothetical protein | AT5G07240:IQD24:IQ-domain 24 | 1 | Chr10:46688122–46693051 (-) | 8.95e-11 | |
| Glyma.10G238700 | hypothetical protein | NA | 1 | Chr10:46721439–46725173 (+) | 8.95e-11 | |
| Glyma.10G239000 | hypothetical protein | NA | 1 | Chr10:46755702–46757579 (-) | 8.95e-11 | |
| Glyma.11G000700 | hypothetical protein | AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein | 1 | Chr11:33497–35198 (+) | 2.231e-11 | |
| Glyma.11G015300 | hypothetical protein | AT3G60500:CER7:3'-5'-exoribonuclease family protein | 1 | Chr11:1048122–1055388 (+) | 5.483e-12 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 3.964e-13 | |
| Glyma.11G048600 | hypothetical protein | AT5G67470:FH6:formin homolog 6 | 1 | Chr11:3634128–3639401 (-) | 1.426e-11 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 4.89e-14 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 2.019e-13 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 2.019e-13 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 2.019e-13 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 2.019e-13 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 2.521e-11 | |
| Glyma.11G070700 | hypothetical protein | NA | 1 | Chr11:5282926–5287258 (+) | 1.018e-11 | |
| Glyma.11G241000 | hypothetical protein | AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein | 1 | Chr11:33526493–33531210 (+) | 4.425e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 4.893e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 4.893e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 2.701e-12 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 2.701e-12 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 9.806e-11 | |
| Glyma.12G193800 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 1 | Chr12:35551596–35559129 (+) | 7.965e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 4.882e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 4.882e-12 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 3.145e-11 | |
| Glyma.14G013500 | hypothetical protein | AT4G25434:NUDT10:nudix hydrolase homolog 10 | 1 | Chr14:1009519–1014238 (+) | 5.628e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 3.149e-12 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 8.308e-11 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 2.932e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 3.784e-14 | |
| Glyma.14G075900 | hypothetical protein | NA | 1 | Chr14:6362111–6364010 (-) | 5.19e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 2.123e-13 | |
| Glyma.14G135100 | hypothetical protein | AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 | 1 | Chr14:23623422–23626499 (-) | 3.007e-11 | |
| Glyma.14G135400 | hypothetical protein | AT2G24570:WRKY17:WRKY DNA-binding protein 17 | 1 | Chr14:23729201–23732285 (-) | 2.762e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 2.991e-13 | |
| Glyma.14G149000 | hypothetical protein | NA | 1 | Chr14:32164321–32167686 (+) | 7.647e-11 | |
| Glyma.14G149700 | hypothetical protein | AT1G77590:LACS9:long chain acyl-CoA synthetase 9 | 1 | Chr14:32271989–32301104 (+) | 3.6e-13 | |
| Glyma.14G149900 | hypothetical protein | NA | 1 | Chr14:32305914–32312520 (-) | 1.768e-12 | |
| Glyma.14G150000 | hypothetical protein | AT1G21830:AT1G21830:uncharacterized protein | 1 | Chr14:32314092–32316626 (+) | 2.058e-14 | |
| Glyma.14G150300 | hypothetical protein | AT4G08330:AT4G08330:uncharacterized protein | 1 | Chr14:32471354–32474446 (-) | 1.2e-13 | |
| Glyma.14G213400 | hypothetical protein | NA | 1 | Chr14:47844823–47847028 (+) | 4.905e-12 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 2.582e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 2.546e-13 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 3.562e-13 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 2.546e-13 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 2.546e-13 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 6.005e-12 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 2.609e-12 | |
| Glyma.15G192400 | hypothetical protein | AT5G49150:GEX2:gamete expressed 2 | 1 | Chr15:20964449–20974340 (+) | 4.848e-12 | |
| Glyma.15G192900 | hypothetical protein | NA | 1 | Chr15:21108370–21110353 (+) | 4.848e-12 | |
| Glyma.16G020200 | hypothetical protein | NA | 1 | Chr16:1828561–1835982 (-) | 2.216e-11 | |
| Glyma.16G025300 | hypothetical protein | NA | 1 | Chr16:2438122–2440528 (-) | 4.512e-11 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 1 | Chr16:2443212–2450834 (-) | 4.512e-11 | |
| Glyma.16G063600 | hypothetical protein | NA | 1 | Chr16:6255512–6260421 (+) | 5.424e-11 | |
| Glyma.16G147500 | hypothetical protein | NA | 1 | Chr16:30832490–30834904 (+) | 3.186e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 4.92e-12 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 4.92e-12 | |
| Glyma.18G045000 | hypothetical protein | AT5G45130:RHA1:Ras small GTP-binding family protein | 1 | Chr18:3889384–3895138 (-) | 6.224e-11 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 3.221e-13 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 3.221e-13 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 3.251e-17 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 3.251e-17 | |
| Glyma.19G128100 | hypothetical protein | NA | 1 | Chr19:38728037–38732422 (+) | 3.068e-13 | |
| Glyma.19G129500 | hypothetical protein | AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein | 1 | Chr19:38884116–38901744 (-) | 1.427e-12 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 1.214e-13 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 5.7e-11 | |
| Glyma.20G114400 | hypothetical protein | AT1G68585:AT1G68585:uncharacterized protein | 1 | Chr20:35614355–35616709 (-) | 7.886e-11 |