SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 182 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P50536 Levetiracetam 170.1042 15.269e-11
P50563 Glabrin A 175.0844 12.246e-12
P50584 Caudoxirene 162.1039 19.552e-15
P50624 Isocitral 152.1184 12.021e-11
P50681 (-)-Echitoveniline 548.2492 13.481e-11
P50704 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1390 14.118e-11
P50714 2-Phenylethyl beta-D-glucopyranoside 284.1247 18.864e-11
P50831 No candidate annotation 523.3469 11.995e-12
P50886 N-(6Z,9Z,12Z-octadecatrienoyl)-ethanolamine 321.2642 12.341e-11
P50976 Taxuspine V 610.2605 11.035e-11