Overview Annotation GWAS Evidence Associated genes

P50704

Metabolite ID
P50704
Deionized mass
174.1390 Da
Average m/z
175.1465
Average RT
27.0876
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)2.443e-13
Glyma.03G046000 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein 1Chr03:5848597–5849782 (-)6.211e-12
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)5.163e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.118e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.118e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.118e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.118e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.292e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.796e-12