P50624
Metabolite ID
P50624
Deionized mass
152.1184 Da
Average m/z
305.2448
Average RT
27.0144
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.729e-12 | |
| Glyma.08G117400 | hypothetical protein | AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein | 2 | Chr08:9054060–9063297 (+) | 1.547e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 1.182e-11 | |
| Glyma.16G196900 | hypothetical protein | NA | 2 | Chr16:35841279–35846894 (-) | 1.147e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.729e-12 | |
| Glyma.01G021600 | hypothetical protein | AT5G65540:AT5G65540:transcription initiation factor TFIID subunit | 1 | Chr01:2189923–2194362 (-) | 4.642e-11 | |
| Glyma.01G021700 | hypothetical protein | NA | 1 | Chr01:2197811–2200232 (+) | 4.265e-11 | |
| Glyma.01G022000 | hypothetical protein | NA | 1 | Chr01:2209688–2210849 (-) | 4.265e-11 | |
| Glyma.01G022200 | hypothetical protein | NA | 1 | Chr01:2212834–2213622 (+) | 4.265e-11 | |
| Glyma.01G022300 | hypothetical protein | NA | 1 | Chr01:2215383–2217438 (+) | 4.082e-11 | |
| Glyma.03G021400 | hypothetical protein | AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein | 1 | Chr03:2202325–2234931 (+) | 3.664e-11 | |
| Glyma.03G022200 | hypothetical protein | NA | 1 | Chr03:2326204–2327764 (+) | 2.164e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 4.599e-11 | |
| Glyma.03G041800 | hypothetical protein | NA | 1 | Chr03:5307518–5311842 (+) | 8.043e-13 | |
| Glyma.03G041900 | hypothetical protein | NA | 1 | Chr03:5313339–5315847 (-) | 2.469e-12 | |
| Glyma.03G152800 | hypothetical protein | AT4G09820:TT8:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr03:36782245–36790298 (+) | 2.45e-12 | |
| Glyma.03G153200 | hypothetical protein | NA | 1 | Chr03:36815745–36819041 (-) | 2.45e-12 | |
| Glyma.03G154000 | hypothetical protein | NA | 1 | Chr03:36898114–36903520 (-) | 1.717e-11 | |
| Glyma.05G130700 | hypothetical protein | AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr05:32376592–32384905 (+) | 3.092e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.061e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 9.018e-18 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 7.209e-13 | |
| Glyma.08G117100 | hypothetical protein | AT2G34190:AT2G34190:Xanthine/uracil permease family protein | 1 | Chr08:9032236–9036159 (+) | 3.847e-11 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 2.311e-11 | |
| Glyma.09G246700 | hypothetical protein | AT1G22840:CYTC-1:CYTOCHROME C-1 | 1 | Chr09:46835469–46838091 (-) | 8.965e-12 | |
| Glyma.09G268900 | hypothetical protein | NA | 1 | Chr09:48638803–48644136 (+) | 1.269e-12 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 2.021e-11 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 2.021e-11 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 2.021e-11 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 2.021e-11 | |
| Glyma.10G229000 | hypothetical protein | NA | 1 | Chr10:45906187–45911386 (+) | 1.669e-12 | |
| Glyma.10G265400 | hypothetical protein | AT2G01290:RPI2: | 1 | Chr10:48921268–48922795 (+) | 2.284e-11 | |
| Glyma.11G026700 | hypothetical protein | AT1G63020:NRPD1A:nuclear RNA polymerase D1A | 1 | Chr11:1908384–1922893 (+) | 9.587e-11 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 3.818e-11 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 3.045e-13 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 3.983e-13 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 3.983e-13 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 3.983e-13 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 3.983e-13 | |
| Glyma.11G070700 | hypothetical protein | NA | 1 | Chr11:5282926–5287258 (+) | 7.056e-13 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 1.94e-12 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 1.94e-12 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 1.94e-12 | |
| Glyma.11G154900 | PRP3 | NA | 1 | Chr11:12643089–12645488 (+) | 1.616e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 5.675e-12 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 5.675e-12 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 6.867e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 1 | Chr12:36406747–36413696 (+) | 3.487e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 1.456e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 1.456e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 5.506e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 5.506e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 5.506e-11 | |
| Glyma.14G068100 | hypothetical protein | AT3G12550:FDM3:XH/XS domain-containing protein | 1 | Chr14:5701618–5711043 (-) | 7.999e-11 | |
| Glyma.14G213400 | hypothetical protein | NA | 1 | Chr14:47844823–47847028 (+) | 4.985e-11 | |
| Glyma.15G275100 | hypothetical protein | AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein | 1 | Chr15:51350998–51355557 (-) | 4.988e-11 | |
| Glyma.16G069300 | hypothetical protein | AT3G01600:NAC044:NAC domain containing protein 44 | 1 | Chr16:6914905–6920531 (+) | 5.955e-11 | |
| Glyma.16G113000 | hypothetical protein | NA | 1 | Chr16:25112070–25116073 (+) | 4.961e-11 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1 | Chr16:34364037–34367765 (-) | 4.696e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 6.492e-11 | |
| Glyma.16G219700 | hypothetical protein | NA | 1 | Chr16:37690133–37695529 (-) | 1.99e-13 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 3.92e-12 | |
| Glyma.19G129500 | hypothetical protein | AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein | 1 | Chr19:38884116–38901744 (-) | 2.618e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 8.973e-11 |