SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G282900

Description hypothetical protein

Gene interval Chr09:49863377–49871270 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1811Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records591

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.3263.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1811 matching features · page 66 of 182

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P02356 No candidate annotation 413.2231 13.834e-12
P02553 (S)-2-Amino-4-methylsulfanyl-butane-1-thiol 151.0476 13.233e-13
P02580 Diacylglycerol kinase inhibitor i 459.1745 13.115e-11
P02600 No candidate annotation 639.2319 11.095e-12
P02697 4-Anilino-4-oxobutanoic acid 193.0732 11.003e-11
P02804 No candidate annotation 242.9603 16.5e-12
P02901 N-2-Mdmn 317.1041 14.973e-11
P02903 4-(4-(4-Fluorophenyl)-1-(piperidin-4-yl)-1H-imidazol-5-yl)-2-methoxypyrimidine 353.1640 12.982e-12
P02908 3-Hydroxy-2-methylglutaric acid 162.0513 11.831e-17
P02965 Nitrofenac 412.0611 12.734e-11