Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P02697

Metabolite ID
P02697
Deionized mass
193.0732 Da
Average m/z
194.0806
Average RT
5.6813
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.108e-15
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 3Chr08:14738283–14742033 (+)4.25e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)5.821e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.375e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.185e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.185e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)4.019e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.108e-15
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)2.329e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.146e-14
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.542e-15
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.271e-12
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)5.855e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)2.346e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)2.346e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)2.346e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)2.346e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.17e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.335e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)2.988e-14
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.704e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)2.553e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.375e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.375e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.375e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.375e-11
Glyma.08G183800 hypothetical protein NA 1Chr08:14744295–14744525 (+)1.736e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.311e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.839e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.899e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)2.176e-13
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)2.455e-14
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.003e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.423e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)6.977e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.576e-14
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.576e-14
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.185e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.185e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.779e-11
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr13:25483702–25502265 (+)1.124e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)8.149e-13
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)8.349e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.314e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)9.032e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)5.821e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)5.821e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)5.821e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)5.821e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.245e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.766e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.823e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.017e-14
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.017e-14
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.435e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.435e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.428e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)8.84e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)7.641e-13