SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.08G117100

Description hypothetical protein

Gene interval Chr08:9032236–9036159 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G34190:AT2G34190:Xanthine/uracil permease family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features170Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

170 matching features · page 17 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P50624 Isocitral 152.1184 13.847e-11
P51137 xi-5-Acetyltetrahydro-2(3H)-furanone 128.0474 18.785e-11
P51162 Cephalosporin P1 574.3490 18.021e-13
P51555 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1404 15.611e-11
P52690 DG(2:0/0:0/18:3(9,11,15)-OH(13)) 410.2662 17.488e-14
P53245 No candidate annotation 258.8909 16.426e-11
P53391 NA 30851A 670.2612 17.427e-11
P54365 Petasinol 352.1708 11.947e-11
P55306 1-O-(2-methoxy-hexadecyl)-sn-glycerol 346.3034 15.909e-11
P55391 No candidate annotation 295.0285 12.616e-13