P52690
Metabolite ID
P52690
Deionized mass
410.2662 Da
Average m/z
411.2738
Average RT
28.9490
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
38
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
38 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G209300 | hypothetical protein | NA | 5 | Chr16:36856833–36863994 (-) | 7.1e-17 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 3 | Chr16:36806718–36809299 (+) | 6.611e-17 | |
| Glyma.16G210200 | hypothetical protein | NA | 3 | Chr16:36933402–36938940 (+) | 1.07e-12 | |
| Glyma.08G117500 | hypothetical protein | AT4G18780:IRX1:cellulose synthase family protein | 2 | Chr08:9065033–9071774 (-) | 9.343e-12 | |
| Glyma.08G119300 | hypothetical protein | AT1G29330:ERD2:ER lumen protein retaining receptor family protein | 2 | Chr08:9198213–9201688 (-) | 1.565e-13 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 4.702e-15 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 5.109e-11 | |
| Glyma.02G151500 | hypothetical protein | AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein | 1 | Chr02:15586732–15588774 (+) | 6.086e-11 | |
| Glyma.04G063900 | hypothetical protein | NA | 1 | Chr04:5310107–5313853 (+) | 2.143e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 6.038e-12 | |
| Glyma.06G285400 | hypothetical protein | AT1G06290:ACX3:acyl-CoA oxidase 3 | 1 | Chr06:47399250–47406151 (+) | 3.828e-12 | |
| Glyma.08G114700 | hypothetical protein | AT3G13600:AT3G13600:calmodulin-binding family protein | 1 | Chr08:8768854–8772973 (-) | 2.997e-12 | |
| Glyma.08G116700 | hypothetical protein | NA | 1 | Chr08:8997512–9003565 (+) | 3.461e-13 | |
| Glyma.08G116800 | hypothetical protein | AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) | 1 | Chr08:9006479–9010442 (-) | 1.181e-12 | |
| Glyma.08G117100 | hypothetical protein | AT2G34190:AT2G34190:Xanthine/uracil permease family protein | 1 | Chr08:9032236–9036159 (+) | 7.488e-14 | |
| Glyma.08G118400 | hypothetical protein | AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr08:9147404–9153858 (-) | 9.343e-12 | |
| Glyma.08G118600 | hypothetical protein | AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) | 1 | Chr08:9169843–9172229 (-) | 6.435e-12 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 6.074e-11 | |
| Glyma.09G133800 | hypothetical protein | NA | 1 | Chr09:33268295–33269240 (+) | 6.592e-11 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 2.661e-11 | |
| Glyma.13G161900 | PAP25 | purple acid phosphatase | AT5G34850:PAP26:purple acid phosphatase 26 | 1 | Chr13:27748190–27752685 (-) | 5.755e-14 |
| Glyma.13G199800 | hypothetical protein | NA | 1 | Chr13:31353786–31356378 (+) | 1.214e-11 | |
| Glyma.14G083200 | hypothetical protein | NA | 1 | Chr14:7249145–7256947 (-) | 1.122e-12 | |
| Glyma.14G084200 | hypothetical protein | NA | 1 | Chr14:7375402–7379417 (-) | 9.089e-14 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 9.04e-11 | |
| Glyma.16G024800 | hypothetical protein | AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 1 | Chr16:2407161–2410997 (-) | 3.228e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 6.691e-11 | |
| Glyma.16G207600 | hypothetical protein | AT5G23550:AT5G23550:Got1/Sft2-like vescicle transport protein family | 1 | Chr16:36733685–36738992 (+) | 4.077e-11 | |
| Glyma.16G207700 | hypothetical protein | AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family | 1 | Chr16:36739878–36743378 (-) | 3.121e-12 | |
| Glyma.16G207900 | hypothetical protein | AT5G08450:AT5G08450:zinc finger CCCH domain protein | 1 | Chr16:36754888–36763450 (+) | 8.416e-14 | |
| Glyma.16G208100 | hypothetical protein | AT5G23530:CXE18:carboxyesterase 18 | 1 | Chr16:36776806–36778169 (+) | 1.253e-12 | |
| Glyma.16G209000 | hypothetical protein | NA | 1 | Chr16:36841786–36845498 (-) | 6.407e-12 | |
| Glyma.16G209400 | hypothetical protein | AT1G17840:ABCG11:white-brown complex-like protein | 1 | Chr16:36871978–36878151 (-) | 1.765e-12 | |
| Glyma.16G209900 | hypothetical protein | NA | 1 | Chr16:36919141–36924601 (+) | 1.07e-12 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 1.49e-14 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 1.49e-14 | |
| Glyma.20G084500 | hypothetical protein | AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A | 1 | Chr20:31666190–31674959 (-) | 4.606e-12 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 7.843e-11 |