Overview Annotation GWAS Evidence Associated genes

P55306

Metabolite ID
P55306
Deionized mass
346.3034 Da
Average m/z
347.3118
Average RT
31.7064
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
134
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

134 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)4.454e-18
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)5.066e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)6.544e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.374e-15
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 3Chr16:36806718–36809299 (+)2.317e-17
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 3Chr16:36871978–36878151 (-)6.221e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)3.486e-16
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 3Chr16:36943073–36948828 (+)8.266e-19
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.507e-16
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.695e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.695e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.566e-14
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)7.142e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)1.182e-15
Glyma.01G039400 hypothetical protein AT1G10417:AT1G10417:RUN/FYVE domain protein 1Chr01:4270598–4275060 (+)7.002e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)2.391e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)5.524e-13
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)9.661e-12
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)9.661e-12
Glyma.02G303800 hypothetical protein AT3G20910:NF-YA9:nuclear factor Y, subunit A9 1Chr02:47896187–47900062 (-)3.938e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)9.661e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.96e-14
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.944e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.187e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.003e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.003e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.265e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.122e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.122e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.122e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)3.282e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.929e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.502e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.526e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.759e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.878e-17
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.451e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)5.503e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)5.503e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)5.503e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.104e-12
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)6.734e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.931e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.931e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.028e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.465e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)6.154e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)6.154e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.131e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)6.497e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.257e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)6.544e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)6.544e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.25e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.574e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.054e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)4.688e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)5.909e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)3.587e-11
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 1Chr08:11253074–11256505 (+)3.678e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)9.406e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)3.814e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)3.267e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)3.267e-11
Glyma.09G057000 hypothetical protein NA 1Chr09:5140625–5145658 (+)7.619e-11
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)5.985e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)1.264e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.291e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)7.746e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)2.174e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.473e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.134e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.425e-14
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)7.684e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)8.581e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)8.479e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)6.402e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)5.993e-13
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)6.649e-13
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 1Chr11:25044939–25052549 (+)4.698e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.844e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.844e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.577e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.577e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.761e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.249e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.915e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.374e-15
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)3.797e-15
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)1.082e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.695e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.695e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.963e-13
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)7.153e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.223e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.726e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)7.142e-11
Glyma.14G194100 hypothetical protein AT5G58620:AT5G58620:zinc finger (CCCH-type) family protein 1Chr14:45920719–45923885 (+)4.574e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.605e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.291e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.736e-14
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)6.288e-11
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)9.069e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.118e-12
Glyma.16G105300 hypothetical protein AT4G19120:ERD3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:21299154–21305321 (-)4.944e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.619e-17
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)2.181e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)2.181e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)2.181e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)5.276e-15
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.228e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.56e-14
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.597e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.837e-12
Glyma.16G207600 hypothetical protein AT5G23550:AT5G23550:Got1/Sft2-like vescicle transport protein family 1Chr16:36733685–36738992 (+)4.602e-12
Glyma.16G207700 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 1Chr16:36739878–36743378 (-)1.576e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)8.909e-11
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36776806–36778169 (+)5.845e-12
Glyma.16G208200 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36780247–36781946 (+)2.05e-11
Glyma.16G208700 hypothetical protein AT5G26360:AT5G26360:TCP-1/cpn60 chaperonin family protein 1Chr16:36814752–36820289 (-)3.967e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)3.486e-16
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.266e-19
Glyma.16G210500 hypothetical protein NA 1Chr16:36959125–36962955 (+)1.866e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)2.965e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.507e-16
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)9.007e-14
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)5.619e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)7.995e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)8.636e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)8.636e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.303e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.68e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.68e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.135e-11