SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 117 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P16774 3-Methylphenylacetic acid 150.0687 19.435e-11
P16775 PA(10:0/13:0) 522.3343 11.194e-12
P16820 Petunidin 3-(6''-malonylglucoside) 564.1095 14.043e-11
P16836 Propyl cinnamate 190.1004 11.512e-12
P16859 Eterobarb 320.1359 12.327e-11
P16861 No candidate annotation 877.2222 12.431e-13
P16866 C75 trans 254.1498 14.179e-11
P16872 Methyl-4-O-caffeoylquinate 368.1086 12.388e-11
P16905 Myricetin 3-rutinoside-7-glucoside 788.2017 12.236e-11
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 14.231e-14