SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 118 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P16945 Cyclopenta[cd]pyrene 226.0786 12.919e-13
P16950 No candidate annotation 808.2062 13.02e-11
P16953 No candidate annotation 755.8854 12.295e-11
P16980 Clavamycin B 362.1462 14.183e-12
P17012 6-Hydroxyluteolin 7-[6''-(3-hydroxy-3-methylglutaryl)glucoside]-3-glucuronide 784.1667 13.056e-12
P17025 No candidate annotation 757.2112 12.748e-11
P17040 L-Arginine phosphate 254.0761 12.232e-18
P17046 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1084 14.178e-13
P17052 2-Methyl-1-hydroxypropyl-ThPP 496.0998 17.972e-17
P17054 Albendazole 2-aminosulphone 312.0873 12.083e-11