Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16836

Metabolite ID
P16836
Deionized mass
190.1004 Da
Average m/z
191.1059
Average RT
12.3773
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.806e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.227e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)1.413e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.806e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.227e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)4.655e-12
Glyma.04G064500 hypothetical protein NA 1Chr04:5367346–5372857 (+)4.577e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)9.02e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.606e-14
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)2.867e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.72e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.618e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.193e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.193e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.512e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.545e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.545e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.545e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)9.498e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.309e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)1.795e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.039e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.393e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.284e-11
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)6.005e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.99e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.442e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.442e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.442e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.442e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.301e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.781e-11
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr12:35551596–35559129 (+)4.553e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)2.568e-14
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)2.568e-14
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.568e-14
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.878e-15
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)1.266e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.323e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.113e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.324e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.323e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.423e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.78e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.575e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.042e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)3.065e-12