P16866
Metabolite ID
P16866
Deionized mass
254.1498 Da
Average m/z
255.1571
Average RT
12.3847
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
102
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
102 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 7.553e-12 | |
| Glyma.16G209300 | hypothetical protein | NA | 4 | Chr16:36856833–36863994 (-) | 5.869e-14 | |
| Glyma.17G217900 | hypothetical protein | NA | 4 | Chr17:36771760–36778616 (-) | 6.483e-12 | |
| Glyma.16G118400 | hypothetical protein | AT2G17190:AT2G17190:ubiquitin family protein | 3 | Chr16:26356863–26371741 (-) | 2.564e-11 | |
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 3 | Chr16:35831912–35835153 (+) | 2.053e-14 | |
| Glyma.16G196900 | hypothetical protein | NA | 3 | Chr16:35841279–35846894 (-) | 2.278e-13 | |
| Glyma.16G210200 | hypothetical protein | NA | 3 | Chr16:36933402–36938940 (+) | 1.569e-12 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 3.872e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.714e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.714e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 7.103e-12 | |
| Glyma.16G219000 | hypothetical protein | NA | 2 | Chr16:37634112–37638596 (-) | 1.953e-11 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 9.827e-14 | |
| Glyma.17G216700 | hypothetical protein | AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein | 2 | Chr17:36510062–36519347 (+) | 7.78e-14 | |
| Glyma.19G188800 | hypothetical protein | AT1G03910:AT1G03910:cactus-binding carboxy-terminal, cactin | 2 | Chr19:44684130–44690198 (+) | 6.399e-13 | |
| Glyma.01G022300 | hypothetical protein | NA | 1 | Chr01:2215383–2217438 (+) | 1.055e-11 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 5.793e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 3.438e-13 | |
| Glyma.03G035800 | hypothetical protein | NA | 1 | Chr03:4317466–4321009 (+) | 5.352e-11 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 4.436e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 2.603e-12 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 4.1e-11 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 1.972e-11 | |
| Glyma.04G190200 | hypothetical protein | AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 | 1 | Chr04:46086785–46089618 (-) | 3.598e-11 | |
| Glyma.04G191400 | hypothetical protein | AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 | 1 | Chr04:46220242–46235879 (+) | 9.609e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 4.179e-11 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 5.155e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 5.155e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 5.155e-11 | |
| Glyma.05G219200 | hypothetical protein | NA | 1 | Chr05:39875137–39879113 (-) | 5.966e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 2.511e-19 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 2.47e-23 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.605e-17 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 7.065e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 7.065e-11 | |
| Glyma.06G200200 | hypothetical protein | NA | 1 | Chr06:18327920–18331068 (-) | 6.017e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 9.418e-12 | |
| Glyma.07G223600 | hypothetical protein | NA | 1 | Chr07:40077049–40082294 (+) | 3.83e-11 | |
| Glyma.08G109000 | SUB1 | NA | 1 | Chr08:8364770–8373803 (-) | 6.54e-11 | |
| Glyma.08G110000 | hypothetical protein | AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein | 1 | Chr08:8438346–8442806 (-) | 6.54e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 3.498e-11 | |
| Glyma.09G249500 | hypothetical protein | NA | 1 | Chr09:47056885–47062577 (+) | 9.478e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 4.767e-11 | |
| Glyma.12G079700 | hypothetical protein | AT1G08110:AT1G08110:lactoylglutathione lyase family protein / glyoxalase I family protein | 1 | Chr12:6241940–6246776 (+) | 4.689e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 1.968e-13 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 1.968e-13 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 4.127e-18 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 4.127e-18 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 8.844e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 8.844e-12 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 4.693e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 2.054e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 2.054e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.714e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.714e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 3.247e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 5.103e-12 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 8.856e-13 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 1.529e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 8.856e-13 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 8.856e-13 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.844e-13 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.67e-15 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 4.083e-14 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 1.323e-11 | |
| Glyma.16G111100 | hypothetical protein | NA | 1 | Chr16:24438458–24444801 (+) | 7.553e-12 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 5.92e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 1.748e-11 | |
| Glyma.16G118200 | hypothetical protein | NA | 1 | Chr16:26337169–26338323 (+) | 2.564e-11 | |
| Glyma.16G118600 | hypothetical protein | NA | 1 | Chr16:26442194–26445922 (+) | 2.564e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 9.676e-12 | |
| Glyma.16G134900 | hypothetical protein | AT5G66470:AT5G66470:GTP-binding protein Era-like protein | 1 | Chr16:29214758–29219443 (-) | 1.618e-11 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 5.346e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 8.125e-13 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 4.798e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 4.798e-11 | |
| Glyma.16G173000 | hypothetical protein | NA | 1 | Chr16:33365497–33367017 (+) | 9.667e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 1.43e-17 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1 | Chr16:34364037–34367765 (-) | 5.27e-11 | |
| Glyma.16G196400 | hypothetical protein | AT5G07270:XBAT33:uncharacterized protein | 1 | Chr16:35782198–35790495 (-) | 1.519e-13 | |
| Glyma.16G209400 | hypothetical protein | AT1G17840:ABCG11:white-brown complex-like protein | 1 | Chr16:36871978–36878151 (-) | 2.51e-12 | |
| Glyma.16G209900 | hypothetical protein | NA | 1 | Chr16:36919141–36924601 (+) | 1.569e-12 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 2.305e-14 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 2.306e-14 | |
| Glyma.16G218700 | hypothetical protein | AT5G22110:DPB2:DNA polymerase epsilon subunit B2 | 1 | Chr16:37608196–37613873 (+) | 2.645e-11 | |
| Glyma.16G219700 | hypothetical protein | NA | 1 | Chr16:37690133–37695529 (-) | 4.345e-13 | |
| Glyma.17G213000 | hypothetical protein | NA | 1 | Chr17:35353582–35358772 (+) | 6.291e-11 | |
| Glyma.17G215300 | hypothetical protein | AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein | 1 | Chr17:36142245–36146771 (-) | 1.571e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 7.502e-13 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 9.827e-14 | |
| Glyma.17G218400 | hypothetical protein | NA | 1 | Chr17:36900654–36906204 (+) | 4.465e-11 | |
| Glyma.18G055400 | hypothetical protein | NA | 1 | Chr18:4824726–4828902 (+) | 7.723e-11 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 1.217e-13 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 5.669e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 5.669e-11 | |
| Glyma.19G187900 | hypothetical protein | AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein | 1 | Chr19:44599748–44609219 (-) | 2.08e-11 | |
| Glyma.19G188200 | hypothetical protein | NA | 1 | Chr19:44647446–44649620 (-) | 6.597e-11 | |
| Glyma.19G188400 | hypothetical protein | AT3G09925:AT3G09925:Pollen Ole e 1 allergen and extensin family protein | 1 | Chr19:44657727–44658640 (-) | 2.213e-11 | |
| Glyma.19G188700 | hypothetical protein | AT2G36660:PAB7:poly(A) binding protein 7 | 1 | Chr19:44674389–44679445 (+) | 5.572e-12 | |
| Glyma.19G189600 | hypothetical protein | AT2G36620:RPL24A:ribosomal protein L24 | 1 | Chr19:44744021–44746094 (+) | 7.265e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 9.762e-13 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 6.71e-11 |