SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G173900

Description hypothetical protein

Gene interval Chr01:51092004–51094319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features320Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0125.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

320 matching features · page 1 of 32

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03559 Methacrifos 240.0210 22.047e-11
P17225 Strychoside A 744.2417 22.179e-14
P25471 Troxerutin 742.2291 22.961e-13
P50092 No candidate annotation 150.1378 28.573e-15
P00008 No candidate annotation 281.8737 14.917e-11
P00048 [2-(Dimethoxymethyl)-1-heptenyl]benzene 248.1733 19.353e-12
P00088 1,3,7-Trimethyl-8-nonylpurine-2,6-dione 320.2263 13.399e-11
P00101 Filgotinib 425.1500 15.642e-11
P00309 2-C-Methyl-1,4-erythrono-D-lactone 132.0422 13.133e-11
P00393 Lactamide 89.0473 18.154e-11