SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.20G108900

Description hypothetical protein

Gene interval Chr20:35119868–35122488 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G24175:AT4G24175:kinesin-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features544Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0055.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

544 matching features · page 38 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39463 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one 312.2143 12.863e-11
P39613 Carboxymethyl chitosan 543.2297 15.305e-11
P39620 PA(TXB2/a-13:0) 720.4204 15.744e-11
P39647 1,10-Epoxy-aristolane 220.1808 15.04e-12
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 16.915e-11
P39708 Methyl N-({(2s,3s)-3-[(Propylamino)carbonyl]oxiran-2-Yl}carbonyl)-L-Isoleucyl-L-Prolinate 397.2207 11.446e-11
P39722 Pellynol H 510.3657 12.172e-11
P39777 Colubrinoside 982.5106 11.47e-12
P39803 2,3,4,5-tetranor-9S,11R,15S-trihydroxy-13E-prostenoic acid 300.1905 17.991e-11
P39839 No candidate annotation 223.1261 11.49e-11