SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G011700

Description hypothetical protein

Gene interval Chr19:1123637–1130946 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G01420:DOX1:Peroxidase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1671Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records773

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4626.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1671 matching features · page 14 of 168

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10692 Deacetylepithienamycin F 352.0405 27.376e-16
P10739 Antibiotic D 788-7 515.1878 21.264e-11
P10785 Pteledimerine 482.2205 21.082e-11
P10800 RA V 756.3531 21.082e-13
P10857 n-propylthiouracil 170.0534 25.764e-13
P10859 Chlorhexidine 504.2037 22.286e-11
P10912 Luzonoside A 624.2429 21.856e-13
P10934 Asperuloide C 602.2568 21.871e-15
P11075 2'-N-Hydroxynocardicin C 502.1697 25.965e-11
P11081 No candidate annotation 685.1489 21.194e-12