P10912
Metabolite ID
P10912
Deionized mass
624.2429 Da
Average m/z
625.2544
Average RT
10.6045
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
131
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
131 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 3.889e-18 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 2.831e-14 | |
| Glyma.06G313500 | hypothetical protein | NA | 3 | Chr06:50191600–50203098 (-) | 1.175e-13 | |
| Glyma.07G100400 | hypothetical protein | AT3G18050:AT3G18050:GPI-anchored protein | 3 | Chr07:9523110–9526319 (+) | 7.592e-14 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 3 | Chr19:1134716–1143232 (+) | 2.03e-13 | |
| Glyma.02G062600 | hypothetical protein | AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein | 2 | Chr02:5645621–5648965 (+) | 7.204e-13 | |
| Glyma.03G018800 | hypothetical protein | AT2G45680:TCP9:TCP family transcription factor | 2 | Chr03:1875182–1876855 (+) | 4.888e-11 | |
| Glyma.10G263800 | hypothetical protein | AT1G23010:LPR1:Cupredoxin superfamily protein | 2 | Chr10:48805999–48811533 (-) | 9.756e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 5.009e-12 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 5.183e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.38e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.38e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 2.334e-12 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 6.503e-14 | |
| Glyma.14G201800 | hypothetical protein | AT5G58390:AT5G58390:Peroxidase superfamily protein | 2 | Chr14:46728613–46733836 (+) | 7.883e-12 | |
| Glyma.16G111100 | hypothetical protein | NA | 2 | Chr16:24438458–24444801 (+) | 3.889e-18 | |
| Glyma.16G111800 | hypothetical protein | AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein | 2 | Chr16:24720965–24731678 (-) | 1.826e-13 | |
| Glyma.17G216700 | hypothetical protein | AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein | 2 | Chr17:36510062–36519347 (+) | 1.735e-13 | |
| Glyma.18G230700 | hypothetical protein | AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) | 2 | Chr18:51943730–51947645 (+) | 6.44e-14 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1123637–1130946 (+) | 1.856e-13 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 2.831e-14 | |
| Glyma.02G061700 | hypothetical protein | AT2G23450:AT2G23450:Protein kinase superfamily protein | 1 | Chr02:5577271–5582873 (-) | 9.371e-11 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 3.335e-11 | |
| Glyma.03G007100 | hypothetical protein | AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… | 1 | Chr03:647777–651152 (-) | 5.126e-11 | |
| Glyma.03G007900 | hypothetical protein | NA | 1 | Chr03:764330–766878 (-) | 8.374e-12 | |
| Glyma.03G018600 | hypothetical protein | AT2G45695:AT2G45695:Ubiquitin related modifier 1 | 1 | Chr03:1859210–1862572 (-) | 4.642e-11 | |
| Glyma.03G021600 | hypothetical protein | AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … | 1 | Chr03:2240686–2246512 (-) | 2.329e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 2.726e-13 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 3.298e-15 | |
| Glyma.03G022900 | hypothetical protein | NA | 1 | Chr03:2409690–2420328 (-) | 8.286e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 9.055e-17 | |
| Glyma.03G124500 | hypothetical protein | NA | 1 | Chr03:33758928–33762195 (+) | 6.391e-12 | |
| Glyma.03G242800 | hypothetical protein | AT4G08630:AT4G08630:fas-binding factor-like protein | 1 | Chr03:44064511–44073939 (+) | 7.466e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 9.485e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 7.379e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 7.379e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 7.717e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 8.478e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 8.478e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 8.478e-13 | |
| Glyma.05G131200 | hypothetical protein | AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein | 1 | Chr05:32421116–32425198 (-) | 3.492e-12 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 8.449e-13 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 6.406e-20 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 4.572e-17 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.514e-18 | |
| Glyma.06G085200 | hypothetical protein | NA | 1 | Chr06:6540849–6545557 (+) | 1.661e-11 | |
| Glyma.06G118500 | hypothetical protein | NA | 1 | Chr06:9644661–9650144 (-) | 3.675e-12 | |
| Glyma.06G118800 | hypothetical protein | NA | 1 | Chr06:9666921–9667708 (+) | 3.675e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 2.963e-19 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 2.963e-19 | |
| Glyma.06G126500 | hypothetical protein | AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr06:10367536–10373426 (-) | 2.415e-15 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 3.086e-14 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 1.545e-12 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 1.756e-11 | |
| Glyma.07G071800 | hypothetical protein | AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein | 1 | Chr07:6523253–6526707 (+) | 3.708e-11 | |
| Glyma.07G075000 | hypothetical protein | AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein | 1 | Chr07:6821674–6829551 (-) | 5.077e-11 | |
| Glyma.07G075300 | hypothetical protein | NA | 1 | Chr07:6843882–6845602 (-) | 5.077e-11 | |
| Glyma.07G078900 | hypothetical protein | AT3G61080:AT3G61080:Protein kinase superfamily protein | 1 | Chr07:7187362–7192149 (+) | 1.096e-11 | |
| Glyma.07G087700 | hypothetical protein | AT3G24495:MSH7:MUTS homolog 7 | 1 | Chr07:8111751–8121053 (+) | 9.529e-11 | |
| Glyma.07G095400 | hypothetical protein | NA | 1 | Chr07:8914725–8920132 (+) | 1.941e-12 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 6.128e-13 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 9.205e-11 | |
| Glyma.09G066400 | hypothetical protein | AT4G29790:AT4G29790:serine/arginine repetitive matrix protein | 1 | Chr09:6509441–6524102 (+) | 7.381e-11 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1 | Chr09:49863377–49871270 (+) | 6.78e-13 | |
| Glyma.10G264300 | Mediator of RNA polymerase II transcription subunit 21 | AT4G04780:MED21:mediator 21 | 1 | Chr10:48858818–48862498 (-) | 1.513e-11 | |
| Glyma.10G265400 | hypothetical protein | AT2G01290:RPI2: | 1 | Chr10:48921268–48922795 (+) | 1.482e-12 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 4.105e-13 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 4.105e-13 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 4.105e-13 | |
| Glyma.11G237700 | hypothetical protein | NA | 1 | Chr11:33203513–33233708 (-) | 1.382e-13 | |
| Glyma.11G238100 | hypothetical protein | AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr11:33261569–33264662 (+) | 2.822e-12 | |
| Glyma.12G049300 | hypothetical protein | NA | 1 | Chr12:3538428–3539170 (-) | 1.18e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 7.414e-12 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 2.543e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 2.543e-12 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 9.652e-11 | |
| Glyma.12G228300 | hypothetical protein | AT3G15030:TCP4:TCP family transcription factor 4 | 1 | Chr12:38813527–38816237 (-) | 8.254e-13 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 5.183e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.38e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.38e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 9.888e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 7.919e-12 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 8.348e-12 | |
| Glyma.14G068100 | hypothetical protein | AT3G12550:FDM3:XH/XS domain-containing protein | 1 | Chr14:5701618–5711043 (-) | 4.777e-13 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 3.915e-16 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 1.153e-20 | |
| Glyma.14G075900 | hypothetical protein | NA | 1 | Chr14:6362111–6364010 (-) | 8.867e-12 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 8.837e-12 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 6.503e-14 | |
| Glyma.14G211800 | hypothetical protein | AT1G66080:AT1G66080:hikeshi-like protein | 1 | Chr14:47664851–47670630 (+) | 1.458e-11 | |
| Glyma.14G213400 | hypothetical protein | NA | 1 | Chr14:47844823–47847028 (+) | 4.919e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 3.241e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 5.078e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 3.241e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 3.241e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 5.763e-13 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 9.662e-16 | |
| Glyma.15G141100 | hypothetical protein | NA | 1 | Chr15:11554310–11555089 (+) | 1.873e-11 | |
| Glyma.15G275100 | hypothetical protein | AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein | 1 | Chr15:51350998–51355557 (-) | 4.537e-13 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 8.446e-12 | |
| Glyma.16G105100 | hypothetical protein | NA | 1 | Chr16:21259552–21267517 (-) | 1.861e-14 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 8.425e-11 | |
| Glyma.16G105700 | hypothetical protein | NA | 1 | Chr16:21404554–21412265 (-) | 1.153e-13 | |
| Glyma.16G105800 | hypothetical protein | NA | 1 | Chr16:21409016–21412087 (-) | 1.153e-13 | |
| Glyma.16G106200 | hypothetical protein | NA | 1 | Chr16:21463300–21469532 (+) | 1.153e-13 | |
| Glyma.16G106300 | hypothetical protein | AT5G23900:AT5G23900:Ribosomal protein L13e family protein | 1 | Chr16:21495147–21497932 (+) | 3.331e-16 | |
| Glyma.16G111200 | hypothetical protein | AT5G65930:ZWI:kinesin-like calmodulin-binding protein (ZWICHEL) | 1 | Chr16:24455709–24466236 (+) | 6.895e-13 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 6.247e-16 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 9.452e-12 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 6.049e-12 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 2.76e-12 | |
| Glyma.16G121000 | IQD20 | AT3G51380:IQD20:IQ-domain 20 | 1 | Chr16:26909514–26910355 (+) | 1.368e-12 | |
| Glyma.16G134900 | hypothetical protein | AT5G66470:AT5G66470:GTP-binding protein Era-like protein | 1 | Chr16:29214758–29219443 (-) | 9.871e-11 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 4.518e-12 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 3.693e-13 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 1.059e-11 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 2.32e-11 | |
| Glyma.16G198600 | hypothetical protein | AT5G52060:BAG1:BCL-2-associated athano 1 | 1 | Chr16:35958085–35960833 (+) | 6.128e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 4.047e-11 | |
| Glyma.17G199600 | hypothetical protein | AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family | 1 | Chr17:31731965–31738073 (+) | 2.157e-13 | |
| Glyma.17G200400 | hypothetical protein | NA | 1 | Chr17:31864566–31869426 (-) | 2.157e-13 | |
| Glyma.17G201000 | hypothetical protein | AT3G49600:UBP26:ubiquitin-specific protease 26 | 1 | Chr17:31946807–31956876 (-) | 2.157e-13 | |
| Glyma.17G205900 | hypothetical protein | NA | 1 | Chr17:33578345–33582235 (-) | 2.124e-11 | |
| Glyma.17G206000 | hypothetical protein | NA | 1 | Chr17:33582328–33583013 (-) | 2.124e-11 | |
| Glyma.17G206100 | hypothetical protein | NA | 1 | Chr17:33612472–33622199 (-) | 2.124e-11 | |
| Glyma.18G106600 | hypothetical protein | NA | 1 | Chr18:11947553–11951868 (+) | 9.056e-11 | |
| Glyma.18G238000 | hypothetical protein | AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein | 1 | Chr18:52679724–52682816 (+) | 1.94e-11 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 1.384e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.969e-14 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.969e-14 | |
| Glyma.20G098400 | hypothetical protein | AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b | 1 | Chr20:34151918–34155417 (+) | 9.27e-11 |