SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 26 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24826 Actinoplanone G 618.1737 15.41e-11
P24951 Homoarbutin 286.1030 19.277e-12
P24976 (20R,22R)-20-O,22-O-(5'-hydroxy-methyl)-furfurylidene-2beta,3beta,25-trihydroxy-14beta-methyl-18-nor-5beta-cholesta-7,12-dien-6-one 570.3155 12.7e-12
P25040 No candidate annotation 274.0733 13.381e-11
P25186 7,10,13,16,19-Docosapentaynoic acid 320.1775 18.275e-13
P25637 trans-p-Ferulyl alcohol 4-O-[6-(2-methyl-3-hydroxypropionyl)] glucopyranoside 428.1667 13.62e-17
P25662 No candidate annotation 1006.3367 12.029e-12
P26107 Spirotryprostatin D 511.2306 14.995e-13
P26120 1,2-dinonanoyl-sn-glycero-3-phosphocholine 537.3455 12.105e-11
P26172 6'-Oxolividamine 305.1605 13.667e-12