P24951
Metabolite ID
P24951
Deionized mass
286.1030 Da
Average m/z
287.1097
Average RT
14.5681
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
104
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
104 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.08G147500 | hypothetical protein | AT3G18680:AT3G18680:Amino acid kinase family protein | 2 | Chr08:11253074–11256505 (+) | 1.464e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 1.177e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.384e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.384e-14 | |
| Glyma.14G071700 | hypothetical protein | AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 | 2 | Chr14:6037810–6041899 (+) | 2.699e-19 | |
| Glyma.01G045400 | hypothetical protein | NA | 1 | Chr01:5140834–5144197 (-) | 2.898e-11 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 2.02e-11 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 7.149e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 9.959e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 9.959e-12 | |
| Glyma.02G074100 | hypothetical protein | AT5G13570:DCP2:decapping 2 | 1 | Chr02:6467452–6472617 (+) | 3.272e-11 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 1.623e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 6.748e-11 | |
| Glyma.03G147400 | hypothetical protein | NA | 1 | Chr03:36293698–36295294 (+) | 3.16e-11 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 2.316e-11 | |
| Glyma.03G242800 | hypothetical protein | AT4G08630:AT4G08630:fas-binding factor-like protein | 1 | Chr03:44064511–44073939 (+) | 9.674e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 9.831e-11 | |
| Glyma.04G104400 | hypothetical protein | NA | 1 | Chr04:9885009–9889282 (+) | 1.894e-11 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 1.746e-13 | |
| Glyma.04G190200 | hypothetical protein | AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 | 1 | Chr04:46086785–46089618 (-) | 4.05e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 3.867e-12 | |
| Glyma.05G126400 | hypothetical protein | NA | 1 | Chr05:31961493–31968339 (+) | 2.909e-11 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 2.865e-14 | |
| Glyma.05G149300 | hypothetical protein | AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein | 1 | Chr05:34357418–34361032 (-) | 8.645e-14 | |
| Glyma.05G149900 | hypothetical protein | NA | 1 | Chr05:34389242–34393621 (-) | 8.645e-14 | |
| Glyma.05G232800 | hypothetical protein | AT3G18500:AT3G18500:DNAse I-like superfamily protein | 1 | Chr05:41022747–41030067 (-) | 5.72e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 3.298e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.551e-15 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.066e-12 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 2.948e-12 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 2.948e-12 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 2.948e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 9.474e-12 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 9.474e-12 | |
| Glyma.06G126500 | hypothetical protein | AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr06:10367536–10373426 (-) | 3.315e-11 | |
| Glyma.07G068000 | hypothetical protein | AT3G61460:BRH1: | 1 | Chr07:6128862–6129740 (+) | 6.635e-11 | |
| Glyma.07G068300 | hypothetical protein | AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase | 1 | Chr07:6169729–6172231 (+) | 6.301e-11 | |
| Glyma.07G068400 | hypothetical protein | AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein | 1 | Chr07:6173172–6180430 (-) | 3.693e-11 | |
| Glyma.07G068600 | hypothetical protein | NA | 1 | Chr07:6192764–6197166 (+) | 3.693e-11 | |
| Glyma.07G068700 | hypothetical protein | AT2G46060:AT2G46060:transmembrane protein-like protein | 1 | Chr07:6200187–6208590 (+) | 2.417e-11 | |
| Glyma.07G068800 | hypothetical protein | NA | 1 | Chr07:6211775–6221107 (-) | 2.417e-11 | |
| Glyma.07G069100 | hypothetical protein | NA | 1 | Chr07:6246145–6250192 (+) | 3.693e-11 | |
| Glyma.07G071000 | hypothetical protein | AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr07:6464646–6470484 (+) | 7.04e-11 | |
| Glyma.07G071800 | hypothetical protein | AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein | 1 | Chr07:6523253–6526707 (+) | 3.792e-11 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 1.851e-11 |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 3.648e-11 | |
| Glyma.08G147200 | hypothetical protein | AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 | 1 | Chr08:11225587–11227445 (+) | 2.912e-12 | |
| Glyma.08G147300 | hypothetical protein | NA | 1 | Chr08:11238871–11242682 (+) | 6.605e-11 | |
| Glyma.08G204800 | hypothetical protein | AT3G16140:PSAH-1:photosystem I subunit H-1 | 1 | Chr08:16601039–16602646 (+) | 1.768e-13 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 1.46e-12 | |
| Glyma.09G060600 | hypothetical protein | AT3G28430:AT3G28430:CLEC16A-like protein | 1 | Chr09:5661672–5675338 (-) | 5.445e-11 | |
| Glyma.09G062900 | hypothetical protein | NA | 1 | Chr09:6004419–6011041 (+) | 1.095e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 1.996e-13 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 2.02e-16 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 2.419e-15 | |
| Glyma.09G249500 | hypothetical protein | NA | 1 | Chr09:47056885–47062577 (+) | 2.4e-11 | |
| Glyma.09G252100 | hypothetical protein | AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | 1 | Chr09:47245185–47248478 (+) | 5.41e-11 | |
| Glyma.09G253800 | hypothetical protein | NA | 1 | Chr09:47356240–47357763 (-) | 3.966e-12 | |
| Glyma.09G253900 | hypothetical protein | NA | 1 | Chr09:47359742–47364806 (-) | 3.966e-12 | |
| Glyma.09G255700 | hypothetical protein | AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein | 1 | Chr09:47507850–47511743 (+) | 2.05e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 4.231e-11 | |
| Glyma.12G095500 | hypothetical protein | AT3G44150:AT3G44150:Expp1 protein | 1 | Chr12:8023570–8027770 (-) | 1.307e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 1.177e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 4.878e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 4.878e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.384e-14 | |
| Glyma.13G180300 | hypothetical protein | NA | 1 | Chr13:29378090–29379784 (-) | 2.745e-11 | |
| Glyma.13G184500 | hypothetical protein | NA | 1 | Chr13:29829471–29834027 (+) | 4.717e-12 | |
| Glyma.13G201600 | hypothetical protein | NA | 1 | Chr13:31521512–31522992 (+) | 2.017e-11 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 4.137e-11 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 4.137e-11 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 4.137e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 2.517e-12 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 2.046e-12 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 2.694e-11 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 3.571e-11 | |
| Glyma.14G071600 | hypothetical protein | AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein | 1 | Chr14:6016839–6019954 (+) | 7.991e-17 | |
| Glyma.14G071800 | hypothetical protein | NA | 1 | Chr14:6040746–6041899 (-) | 2.699e-19 | |
| Glyma.14G071900 | hypothetical protein | AT1G19650:AT1G19650:Sec14p-like phosphatidylinositol transfer family protein__AT1G75370:AT1G75370:Sec14p-like phosphati… | 1 | Chr14:6043655–6049030 (+) | 2.144e-11 | |
| Glyma.14G072200 | Ipk1 | AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… | 1 | Chr14:6059598–6063755 (-) | 4.012e-13 | |
| Glyma.14G072600 | hypothetical protein | NA | 1 | Chr14:6097297–6102480 (-) | 8.488e-12 | |
| Glyma.14G073100 | hypothetical protein | AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein | 1 | Chr14:6138618–6142249 (-) | 7.003e-12 | |
| Glyma.14G073200 | hypothetical protein | NA | 1 | Chr14:6151199–6153371 (-) | 7.003e-12 | |
| Glyma.14G075900 | hypothetical protein | NA | 1 | Chr14:6362111–6364010 (-) | 1.502e-11 | |
| Glyma.14G077100 | hypothetical protein | AT5G42610:AT5G42610:calcium uniporter (DUF607) | 1 | Chr14:6486139–6488935 (+) | 8.565e-11 | |
| Glyma.14G077200 | hypothetical protein | AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein | 1 | Chr14:6498564–6506068 (+) | 8.565e-11 | |
| Glyma.14G077300 | hypothetical protein | AT1G75040:PR5:pathosis-related protein 5 | 1 | Chr14:6508609–6520744 (-) | 8.565e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 1 | Chr14:8654730–8655892 (-) | 3.671e-12 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 1.771e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 2.526e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 1.771e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 1.771e-11 | |
| Glyma.15G256300 | hypothetical protein | NA | 1 | Chr15:48546007–48547401 (-) | 3.047e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 9.319e-11 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 2.661e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 2.556e-13 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 2.556e-13 | |
| Glyma.17G121800 | hypothetical protein | AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 | 1 | Chr17:9746590–9748712 (+) | 9.277e-12 | |
| Glyma.18G238000 | hypothetical protein | AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein | 1 | Chr18:52679724–52682816 (+) | 6.273e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 2.301e-12 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 3.285e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.152e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.152e-11 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 2.245e-11 |