SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G179000

Description hypothetical protein

Gene interval Chr16:33962757–33966062 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features13Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0769.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

13 matching features · page 1 of 2

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00573 No candidate annotation 614.0229 29.207e-13
P08804 4-Maleylacetoacetate 200.0323 15.828e-11
P15162 No candidate annotation 923.4530 15.891e-11
P15634 No candidate annotation 151.1054 18.363e-12
P17619 14,15-Dihydroxygelsenicine 358.1494 17.994e-11
P23067 Juncenolide A 570.2230 11.701e-11
P24004 Phorate 260.0144 11.078e-11
P29891 Ustilipid C 634.3999 18.745e-11
P31688 PGP(PGE2/i-12:0) 842.4132 12.449e-12
P40299 6,6-dimethoxy-octanoic acid 204.1359 11.055e-14