Overview Annotation GWAS Evidence Associated genes

P17619

Metabolite ID
P17619
Deionized mass
358.1494 Da
Average m/z
359.1548
Average RT
12.5812
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)2.035e-15
Glyma.16G178800 hypothetical protein NA 2Chr16:33950003–33953968 (-)7.94e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)2.838e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.676e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.196e-11
Glyma.07G040200 hypothetical protein NA 1Chr07:3324393–3329481 (-)2.422e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.949e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.332e-13
Glyma.09G133800 hypothetical protein NA 1Chr09:33268295–33269240 (+)8.435e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.121e-11
Glyma.11G239100 hypothetical protein NA 1Chr11:33341784–33344981 (+)4.734e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.409e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.843e-12
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)8.023e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)4.927e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)4.927e-11
Glyma.16G178700 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 1Chr16:33941617–33948775 (+)1.071e-11
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 1Chr16:33954446–33960344 (+)1.071e-11
Glyma.16G179000 hypothetical protein NA 1Chr16:33962757–33966062 (-)7.994e-11
Glyma.16G179100 BCH2 beta-carotene hydroxylase BCH2 AT4G25700:BETA-OHASE 1:beta-hydroxylase 1__AT5G52570:BETA-OHASE 2:beta-carotene hydroxylase 2 1Chr16:33969618–33972333 (-)1.071e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)4.945e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)2.958e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.35e-13