Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15162

Metabolite ID
P15162
Deionized mass
923.4530 Da
Average m/z
924.4614
Average RT
11.9413
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
74
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

74 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.244e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 2Chr02:39040135–39043181 (-)4.063e-14
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)5.644e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.135e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.76e-20
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.731e-14
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.477e-14
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.081e-15
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 1Chr01:1573790–1583422 (+)2.127e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)5.785e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.344e-13
Glyma.02G205500 hypothetical protein AT5G57870:eIFiso4G1:MIF4G domain-containing protein / MA3 domain-containing protein 1Chr02:39045905–39052694 (-)6.066e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)1.751e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)1.751e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)1.751e-11
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)6.892e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.216e-11
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)6.092e-12
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)7.464e-13
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)7.21e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)3.848e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)3.848e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)4.013e-12
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)3.438e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)4.642e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.244e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.244e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.088e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.135e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.135e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.135e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.135e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.746e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.585e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)2.105e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.863e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)7.637e-13
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)6.475e-11
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)6.475e-11
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)6.475e-11
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 1Chr11:3634128–3639401 (-)3.66e-11
Glyma.11G233100 hypothetical protein NA 1Chr11:32840573–32844286 (+)6.623e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.941e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.422e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.422e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.545e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.446e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.624e-13
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)1.834e-11
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)2.053e-11
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 1Chr14:23729201–23732285 (-)3.003e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.731e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.477e-14
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)3.558e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.662e-13
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)5.257e-12
Glyma.16G165300 hypothetical protein NA 1Chr16:32447317–32449688 (-)1.492e-12
Glyma.16G179000 hypothetical protein NA 1Chr16:33962757–33966062 (-)5.891e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.821e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)6.596e-11
Glyma.17G007400 hypothetical protein NA 1Chr17:630066–634738 (-)4.612e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.003e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.003e-12
Glyma.17G110600 hypothetical protein AT2G11000:MAK10:MAK10 homologue 1Chr17:8660704–8669300 (+)1.734e-11
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)7.611e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.692e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.692e-15
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.34e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.804e-12
Glyma.19G147000 hypothetical protein NA 1Chr19:40784257–40785271 (-)1.018e-11
Glyma.19G147100 hypothetical protein NA 1Chr19:40799107–40802473 (+)1.018e-11
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)8.59e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)1.375e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.389e-11