Overview Annotation GWAS Evidence Associated genes

P24004

Metabolite ID
P24004
Deionized mass
260.0144 Da
Average m/z
261.0196
Average RT
14.2901
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.552e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.741e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.595e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.758e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.366e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)7.086e-11
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 1Chr16:3909907–3912569 (+)1.903e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.872e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.571e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.732e-12
Glyma.16G179000 hypothetical protein NA 1Chr16:33962757–33966062 (-)1.078e-11