SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G178800

Description hypothetical protein

Gene interval Chr16:33950003–33953968 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features105Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records75

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.8476.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

105 matching features · page 10 of 11

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19317 Taxinine B 664.2887 19.174e-11
P19411 L-Alanyl-L-glutamate 218.0921 15.159e-11
P20514 Pentacarboxyl porphyrinogen III 700.2711 18.72e-11
P22299 Pubescenine 495.2821 18.549e-11
P26285 No candidate annotation 175.0710 16.208e-11
P27504 17beta-Amino-5alpha-androstan-11beta-ol 291.2613 11.089e-11
P31493 Clocinizine 402.1832 14.087e-11
P31621 No candidate annotation 820.2727 14.043e-12
P32158 Xanthoxoline 271.0806 16.738e-11
P46201 No candidate annotation 195.1317 14.109e-11