Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19411

Metabolite ID
P19411
Deionized mass
218.0921 Da
Average m/z
219.1004
Average RT
13.0405
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
73
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

73 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)1.322e-16
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)2.954e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)4.162e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)3.077e-17
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)6.024e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)6.432e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)1.641e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)4.525e-16
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)4.525e-16
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.936e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.305e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.305e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.879e-13
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)5.064e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.136e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.383e-15
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)2.068e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)2.512e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.571e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.245e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.743e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.743e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)8.58e-13
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)5.148e-13
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)1.019e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.567e-14
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.105e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.783e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)1.654e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)3.287e-11
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)2.153e-12
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)2.153e-12
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)2.153e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.13e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.307e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.079e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.446e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.162e-16
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.162e-16
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.162e-16
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.162e-16
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)1.222e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.712e-16
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)1.222e-13
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)3.562e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)9.539e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.785e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.785e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.785e-13
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 1Chr11:25044939–25052549 (+)9.927e-11
Glyma.11G192600 hypothetical protein AT2G28200:AT2G28200:C2H2-type zinc finger family protein 1Chr11:26572944–26574724 (-)4.738e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.295e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.295e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.024e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.716e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.716e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.716e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)6.381e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.146e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)9.728e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.879e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.878e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.418e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)5.418e-11
Glyma.16G147900 hypothetical protein NA 1Chr16:30864919–30872425 (+)4.724e-12
Glyma.16G178800 hypothetical protein NA 1Chr16:33950003–33953968 (-)5.159e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.485e-12
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)6.751e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)2.845e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)8.368e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)3.007e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)3.007e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.283e-11