Overview Annotation GWAS Evidence Associated genes

P20514

Metabolite ID
P20514
Deionized mass
700.2711 Da
Average m/z
701.2769
Average RT
13.3227
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
146
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

146 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 4Chr16:30652378–30659548 (+)4.195e-13
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)1.588e-17
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.437e-13
Glyma.08G148300 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 3Chr08:11312041–11345534 (-)1.051e-11
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 2Chr03:44673965–44702804 (-)5.272e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 2Chr06:49420013–49426780 (-)6.208e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)1.093e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.7e-12
Glyma.08G148100 hypothetical protein AT1G78570:RHM1:rhamnose biosynthesis 1 2Chr08:11291040–11298606 (-)1.051e-11
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)2.398e-13
Glyma.01G091100 hypothetical protein AT3G25620:ABCG21:ABC-2 type transporter family protein 1Chr01:27547798–27553665 (+)1.183e-11
Glyma.01G091600 hypothetical protein NA 1Chr01:27742157–27745328 (+)1.183e-11
Glyma.01G092800 hypothetical protein NA 1Chr01:28007203–28025553 (+)1.183e-11
Glyma.01G093200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 1Chr01:28284751–28302644 (-)1.183e-11
Glyma.01G093900 hypothetical protein NA 1Chr01:28613090–28637203 (-)1.183e-11
Glyma.01G094200 hypothetical protein AT3G60240:EIF4G:eukaryotic translation initiation factor 4G 1Chr01:28799545–28809703 (+)1.183e-11
Glyma.01G094800 hypothetical protein NA 1Chr01:29243952–29260961 (+)1.183e-11
Glyma.01G096700 hypothetical protein NA 1Chr01:31374967–31380201 (+)2.104e-12
Glyma.01G097200 hypothetical protein NA 1Chr01:32004780–32010521 (-)1.183e-11
Glyma.01G097400 hypothetical protein AT4G37870:PCK1:phosphoenolpyruvate carboxykinase 1 1Chr01:32025239–32034226 (-)1.183e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.866e-11
Glyma.01G230800 hypothetical protein AT4G10050:AT4G10050:esterase/lipase/thioesterase family protein 1Chr01:55803995–55808033 (+)3.824e-12
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 1Chr01:55836387–55840615 (+)1.623e-12
Glyma.01G231700 hypothetical protein AT4G10180:DET1:light-mediated development protein 1 / deetiolated1 (DET1) 1Chr01:55856415–55863866 (+)3.299e-11
Glyma.01G231900 hypothetical protein AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein 1Chr01:55869836–55872417 (+)5.36e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.045e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)1.699e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.77e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.61e-14
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)1.187e-12
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)3.939e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.013e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.52e-12
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)3.607e-12
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)1.02e-11
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)9.475e-11
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 1Chr03:44616824–44621636 (-)4.332e-11
Glyma.03G258000 hypothetical protein AT4G00980:AT4G00980:zinc knuckle (CCHC-type) family protein 1Chr03:45241396–45246507 (+)3.155e-11
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)3.244e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.582e-14
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.246e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.406e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.212e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.212e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.82e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.633e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.633e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.633e-13
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)2.769e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)2.859e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)7.843e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.863e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.375e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.884e-16
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.188e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.188e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.188e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.968e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.968e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)9.842e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.382e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)7.553e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)8.767e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)8.767e-11
Glyma.06G305100 hypothetical protein NA 1Chr06:49413291–49417661 (-)2.757e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.439e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.438e-13
Glyma.06G320000 hypothetical protein AT1G05740:AT1G05740:FAM136A-like protein (DUF842) 1Chr06:50870241–50873816 (+)4.245e-11
Glyma.06G320100 hypothetical protein AT5G56290:PEX5:peroxin 5 1Chr06:50874167–50888925 (-)4.245e-11
Glyma.06G320500 hypothetical protein NA 1Chr06:50915085–50918194 (+)4.176e-12
Glyma.06G320800 IF7GT6 isoflavone 7-O-glucosyltransferase UGT6 NA 1Chr06:50951025–50956134 (-)1.164e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.454e-14
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.414e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.7e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.7e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.7e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.7e-12
Glyma.08G147900 hypothetical protein AT5G09760:AT5G09760:Plant invertase/pectin methylesterase inhibitor superfamily 1Chr08:11278955–11281587 (-)1.051e-11
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)1.253e-15
Glyma.08G150300 hypothetical protein NA 1Chr08:11550134–11555581 (+)4.794e-11
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)7.035e-11
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)7.035e-11
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)7.035e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.552e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.017e-14
Glyma.10G038400 hypothetical protein NA 1Chr10:3400759–3409406 (+)8.415e-11
Glyma.10G038600 hypothetical protein AT4G28540:CKL6:casein kinase I-like 6 1Chr10:3423991–3432355 (+)6.167e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.064e-16
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.064e-16
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.064e-16
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.064e-16
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)9.864e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.91e-14
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)9.864e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.846e-16
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.084e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.251e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.251e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.251e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.251e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)4.094e-14
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)5.995e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)5.995e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)5.995e-13
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)5.317e-12
Glyma.11G192600 hypothetical protein AT2G28200:AT2G28200:C2H2-type zinc finger family protein 1Chr11:26572944–26574724 (-)1.098e-12
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)6.58e-13
Glyma.11G239100 hypothetical protein NA 1Chr11:33341784–33344981 (+)4.763e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.538e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.687e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.688e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)4.672e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.206e-12
Glyma.13G202000 hypothetical protein NA 1Chr13:31566728–31571708 (-)6.767e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.055e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.475e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.602e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.475e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.475e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.813e-17
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)1.367e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)3.585e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)2.533e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.008e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.829e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)1.07e-12
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)2.006e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.659e-12
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)2.259e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)8.742e-11
Glyma.16G178800 hypothetical protein NA 1Chr16:33950003–33953968 (-)8.72e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.397e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.397e-11
Glyma.17G008200 hypothetical protein NA 1Chr17:685577–688365 (+)2.137e-12
Glyma.17G008600 hypothetical protein AT4G22360:AT4G22360:SWIB complex BAF60b domain-containing protein 1Chr17:711744–716737 (-)4.944e-12
Glyma.17G008800 hypothetical protein NA 1Chr17:725683–728962 (+)5.03e-12
Glyma.17G009100 hypothetical protein AT4G22300:SOBER1:carboxylesterase__AT4G22305:AT4G22305:alpha/beta-Hydrolases superfamily protein 1Chr17:739369–742912 (+)2.912e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.348e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.348e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.078e-13
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)3.961e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.847e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.781e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.781e-12
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.012e-13
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)7.066e-12