SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G176100

Description hypothetical protein

Gene interval Chr16:33736100–33743654 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G11810:AT4G11810:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features10Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1000.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

10 matching features · page 1 of 1

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11076 Amino leucine 146.1063 22.073e-13
P00580 D-Glucuronolactone 176.0294 13.932e-12
P08708 Glutaminylvaline 245.1350 16.536e-11
P14240 dehydro-beta-Ionone 190.1342 11.852e-11
P14950 Asterelin B 436.1700 14.699e-11
P19718 O-Desmethylcarvedilol 392.1737 11.544e-11
P24957 Sodium humate 482.2104 11.422e-11
P33884 Stephalonine G 541.2389 15.587e-11
P34652 LysoPI(20:0/0:0) 628.3562 19.847e-11
P42139 Alloeremophilone 218.1653 14.311e-11