Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08708

Metabolite ID
P08708
Deionized mass
245.1350 Da
Average m/z
246.1422
Average RT
9.8960
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)2.815e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)5.005e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.03e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)8.544e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)5.685e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.68e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)9.915e-11
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)3.518e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.542e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.542e-11
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)2.254e-12
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 1Chr04:46220242–46235879 (+)7.608e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.196e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.243e-14
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)6.491e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.451e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.228e-13
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)4.099e-13
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)9.873e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)6.897e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)2.314e-12
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)1.892e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.04e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.04e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.98e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.98e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.895e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.895e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.712e-11
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 1Chr14:23729201–23732285 (-)2.901e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.03e-12
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)2.91e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.419e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.056e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.419e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.419e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.296e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)8.077e-11
Glyma.16G176100 hypothetical protein AT4G11810:AT4G11810:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein 1Chr16:33736100–33743654 (-)6.536e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.18e-16
Glyma.16G180400 hypothetical protein AT5G23950:AT5G23950:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr16:34093033–34094634 (+)2.518e-11
Glyma.16G180800 hypothetical protein AT1G02260:AT1G02260:Divalent ion symporter 1Chr16:34164228–34171821 (+)6.064e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)3.902e-11
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)9.631e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.489e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.489e-11