Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14240

Metabolite ID
P14240
Deionized mass
190.1342 Da
Average m/z
191.1418
Average RT
11.6961
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.429e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.761e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.761e-11
Glyma.14G036100 hypothetical protein AT5G12220:AT5G12220:las1-like family protein 2Chr14:2686475–2694769 (+)4.212e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)9.612e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.431e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.112e-11
Glyma.05G041800 hypothetical protein NA 1Chr05:3744640–3749704 (+)4.494e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.166e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.775e-14
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.154e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.154e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)5.083e-12
Glyma.08G136700 hypothetical protein NA 1Chr08:10457207–10460163 (-)9.619e-11
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)4.635e-12
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)4.635e-12
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)4.635e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.237e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)4.112e-13
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)6.301e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)6.301e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)6.527e-12
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)3.179e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.035e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.035e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.106e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.196e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.196e-12
Glyma.13G062200 hypothetical protein AT5G15270:AT5G15270:RNA-binding KH domain-containing protein 1Chr13:15985083–15991185 (-)6.934e-11
Glyma.13G062500 hypothetical protein NA 1Chr13:16016181–16019533 (-)6.934e-11
Glyma.13G065700 hypothetical protein AT5G52340:EXO70A2:exocyst subunit exo70 family protein A2 1Chr13:16562147–16567390 (+)8.753e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.979e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.979e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.761e-11
Glyma.13G166300 hypothetical protein NA 1Chr13:28110251–28113628 (-)4.649e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.25e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.278e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.332e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.332e-11
Glyma.16G176100 hypothetical protein AT4G11810:AT4G11810:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein 1Chr16:33736100–33743654 (-)1.852e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.072e-11
Glyma.16G180400 hypothetical protein AT5G23950:AT5G23950:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr16:34093033–34094634 (+)7.772e-12
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)6.19e-11