SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G144700

Description hypothetical protein

Gene interval Chr16:30514629–30519598 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G66960:AT5G66960:Prolyl oligopeptidase family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features678Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records211

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.3112.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

678 matching features · page 25 of 68

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04788 No candidate annotation 482.6426 12.8e-11
P05080 N-Dealkylated derivative 561.1862 17.301e-11
P05237 (E)-2-Tridecene-4,6,8-triyn-1-ol 186.1050 12.434e-13
P05243 5'-Deoxy-5'-fluoroadenosine 269.0921 12.986e-11
P05251 Spicatolide C 312.1267 15.803e-13
P05252 Crotamiton 203.1311 16.87e-12
P05271 Fukanemarin A 396.1936 11.141e-13
P05304 desmethyladinazolam 323.0930 14.92e-12
P05479 Isopropyl 4-(1-(2-fluoro-4-(methylsulfonyl)phenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-yloxy)piperidine-1-carboxylate 477.1448 15.996e-11
P05523 (S)-3-Ethylidenehexahydropyrrolo[1,2-a]pyrazine-1,4-dione 180.0880 19.935e-12